Expression viewer

Gene annotation for LOC4347875

Platform:
Species osa
Symbol LOC4347875
Function* arogenate dehydratase/prephenate dehydratase 6, chloroplastic
Entrez Gene ID* 4347875
Other ID Os09g0565700




Expression pattern of LOC4347875



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.1 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.8 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.8 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.8 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
9.7 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
9.7 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.5 SRP010960 SRR408730 Oryza sativa Japonica Group Transcriptome or Gene expression
9.4 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.4 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.4 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.4 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.4 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
9.3 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
9.3 SRP309118 SRR13847349 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
9.2 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.2 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.2 SRP151597 SRR7450914 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
9.2 DRP000716 DRR002720 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.2 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.2 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.1 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
9.1 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.1 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.1 SRP181124 SRR8469599 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.1 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.0 SRP357677 SRR17843178 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
9.0 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
9.0 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.0 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.0 SRP041468 SRR1985027 Oryza sativa Japonica Group Transcriptome or Gene expression
9.0 SRP181124 SRR8469602 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.0 SRP331960 SRR18358778 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.0 SRP041468 SRR1985026 Oryza sativa Japonica Group Transcriptome or Gene expression
9.0 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.0 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
8.9 SRP170932 SRR8247768 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
8.9 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
8.9 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.9 SRP327364 SRR15060326 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.9 DRP000716 DRR002694 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
8.9 SRP115210 SRR5925568 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.9 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.8 DRP000716 DRR002693 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
8.8 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.8 SRP181124 SRR8469598 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
8.8 SRP258176 SRR11601220 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
8.8 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
8.8 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.8 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.8 DRP001141 DRR013395 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
8.7 SRP327364 SRR15060338 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.7 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP115210 SRR5925571 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP258176 SRR11601221 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
8.7 SRP151597 SRR7450898 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
8.7 SRP309118 SRR13847372 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
8.7 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.7 DRP000716 DRR002719 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
8.7 SRP115210 SRR5925569 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP331960 SRR15411214 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.7 SRP170932 SRR8247769 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
8.7 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.7 SRP220388 SRR10058417 Oryza sativa Transcriptome or Gene expression
8.7 SRP092175 SRR4457235 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
8.6 SRP167327 SRR8140277 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
8.6 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.6 SRP331960 SRR15411190 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.6 ERP024350 ERR2061607 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
8.6 SRP362107 SRR18189496 Oryza sativa Transcriptome or Gene expression
8.6 SRP131107 SRR6502085 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
8.6 DRP000716 DRR002707 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
8.6 SRP167327 SRR8140273 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
8.6 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.6 SRP167327 SRR8140274 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
8.6 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
8.6 SRP115210 SRR5925572 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.6 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
8.6 SRP331960 SRR15411195 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.6 SRP167327 SRR8140278 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
8.6 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.5 ERP024350 ERR2061597 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
8.5 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.5 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.5 SRP092175 SRR4457241 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
8.5 SRP115210 SRR5925570 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.5 DRP001141 DRR013394 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
8.5 SRP115210 SRR5925502 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.5 SRP041468 SRR1985047 Oryza sativa Japonica Group Transcriptome or Gene expression
8.5 SRP356482 SRR17720822 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
8.5 SRP270778 SRR12165255 RNA-seq analysis of different sub-regions of developing grains in rice
8.5 SRP083700 SRR4098178 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.5 SRP327364 SRR15060315 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.5 DRP001141 DRR013391 Gene expression profiling of the early cadmium response includes abiotic stress signaling pathway in rice
8.5 SRP106796 SRR5526308 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
8.5 SRP327364 SRR15060327 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.5 DRP000716 DRR002695 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
The output is the 100 samples with the largest contribution to the coexpression.



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