Expression viewer

Gene annotation for LOC4347990

Platform:
Species osa
Symbol LOC4347990
Function* uncharacterized LOC4347990
Entrez Gene ID* 4347990
Other ID Os10g0116900




Expression pattern of LOC4347990



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.5 SRP331960 SRR18358777 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.4 SRP331960 SRR18358778 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.3 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
10.8 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.7 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.6 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.6 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.5 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.5 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.5 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.4 SRP331960 SRR18358776 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.4 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.4 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.4 SRP170932 SRR8247777 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
10.4 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.4 SRP258176 SRR11601223 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.4 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.3 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.3 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.3 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.3 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.3 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.3 SRP083700 SRR4098178 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.2 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.2 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.2 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.2 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
10.2 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
10.2 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
10.2 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.2 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.2 SRP309118 SRR13847350 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.1 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.1 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.1 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.1 SRP049054 SRR1616169 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
10.1 SRP327364 SRR15060374 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.0 SRP106796 SRR5526314 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
10.0 SRP331960 SRR15411195 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.0 SRP181124 SRR8469599 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
10.0 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.0 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.0 SRP010960 SRR408742 Oryza sativa Japonica Group Transcriptome or Gene expression
10.0 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.0 SRP041468 SRR1985027 Oryza sativa Japonica Group Transcriptome or Gene expression
10.0 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
10.0 SRP115210 SRR5925528 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP106796 SRR5526312 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
9.9 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.9 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.9 SRP115210 SRR5925512 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP309118 SRR13847368 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
9.9 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.9 SRP327364 SRR15060452 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.9 SRP115210 SRR5925530 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.9 SRP041468 SRR1985035 Oryza sativa Japonica Group Transcriptome or Gene expression
9.8 SRP115210 SRR5925527 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 SRP258176 SRR11601222 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
9.8 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.8 SRP181124 SRR8469592 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.8 SRP181124 SRR8469618 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.8 SRP115210 SRR5925510 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 DRP000716 DRR002683 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.8 SRP327364 SRR15060436 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.8 SRP115210 SRR5925529 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 SRP115210 SRR5925511 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.8 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.8 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.8 SRP357677 SRR17843174 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
9.8 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
9.8 DRP000315 DRR000763 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
9.8 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
9.8 DRP000716 DRR002698 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.8 DRP000716 DRR002711 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
9.8 ERP024350 ERR2061600 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
9.8 SRP327364 SRR15060453 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
9.8 SRP115210 SRR5925509 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP041468 SRR1987329 Oryza sativa Japonica Group Transcriptome or Gene expression
9.7 SRP056884 SRR1952793 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
9.7 SRP167327 SRR8140270 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
9.7 SRP167327 SRR8140269 A novel positive feed-back loop mediated by the membrane-associated transcription factor NTL3 is important for heat stress tolerance in rice
9.7 SRP181124 SRR8469601 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.7 SRP181124 SRR8469602 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
9.7 SRP115030 SRR5909331 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
9.7 SRP115210 SRR5925544 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.7 SRP362107 SRR18189503 Oryza sativa Transcriptome or Gene expression
9.6 SRP356482 SRR17720822 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
The output is the 100 samples with the largest contribution to the coexpression.



The preparation time of this page was 0.1 [sec].