Expression viewer

Gene annotation for LOC4348804

Platform:
Species osa
Symbol LOC4348804
Function* 3-ketoacyl-CoA thiolase 2, peroxisomal
Entrez Gene ID* 4348804
Other ID Os10g0457600




Expression pattern of LOC4348804



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
13.0 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
12.6 SRP041468 SRR1264034 Oryza sativa Japonica Group Transcriptome or Gene expression
12.2 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
12.0 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.9 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.9 SRP115030 SRR5909337 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.7 SRP181124 SRR8469599 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.7 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.7 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.6 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.6 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.6 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP181124 SRR8469602 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.6 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP327364 SRR15060436 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.5 SRP331960 SRR18358777 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.5 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.5 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.5 SRP049054 SRR1616148 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
11.5 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.5 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP309118 SRR13847350 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.5 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.5 DRP000716 DRR002716 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.5 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.5 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.4 SRP356482 SRR17720822 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.4 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.4 DRP000716 DRR002717 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.4 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
11.4 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.4 SRP331960 SRR15411171 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.4 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP327364 SRR15060438 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.4 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.4 ERP024350 ERR2061602 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
11.4 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.4 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.4 SRP327364 SRR15060374 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.3 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.3 SRP331960 SRR18358778 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.3 DRP000716 DRR002714 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.3 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
11.3 SRP331960 SRR15411172 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.2 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 SRP092175 SRR4457232 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.2 SRP181124 SRR8469600 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.2 ERP024350 ERR2061603 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
11.2 SRP309118 SRR13847347 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.2 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.2 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP041468 SRR1564282 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP083700 SRR4098178 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.2 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.2 SRP181124 SRR8469594 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.2 SRP041468 SRR1985027 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP357677 SRR17843174 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
11.2 SRP357677 SRR17843169 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
11.2 SRP220388 SRR10058417 Oryza sativa Transcriptome or Gene expression
11.1 SRP327364 SRR15060453 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.1 SRP258176 SRR11601222 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.1 DRP000315 DRR000763 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.1 SRP181124 SRR8469588 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.1 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP254459 SRR11444588 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.1 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.1 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 DRP000315 DRR000753 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.1 SRP115030 SRR5909336 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
11.1 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.0 SRP327364 SRR15060452 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
11.0 SRP170932 SRR8247777 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
11.0 DRP000716 DRR002702 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.0 SRP106796 SRR5526312 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
11.0 SRP093884 SRR5052708 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
11.0 SRP041468 SRR1264036 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 DRP000315 DRR000749 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
11.0 DRP000716 DRR002715 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.0 SRP254459 SRR11444591 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
11.0 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP106796 SRR5526308 Co-overexpression of the constitutively active form of OsbZIP46 and ABA-activated protein kinase SAPK6 improves drought and temperature stress resistance in rice
11.0 SRP170932 SRR8247778 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
11.0 SRP041468 SRR1264030 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 SRP131107 SRR6502091 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
11.0 SRP151597 SRR7450914 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
11.0 SRP220388 SRR10058420 Oryza sativa Transcriptome or Gene expression
11.0 SRP092175 SRR4457258 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
The output is the 100 samples with the largest contribution to the coexpression.



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