Expression viewer

Gene annotation for LOC4352613

Platform:
Species osa
Symbol LOC4352613
Function* probable inactive purple acid phosphatase 1
Entrez Gene ID* 4352613
Other ID Os12g0576700




Expression pattern of LOC4352613



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.7 SRP270778 SRR12165262 RNA-seq analysis of different sub-regions of developing grains in rice
9.7 SRP331960 SRR18358777 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.6 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.6 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
9.3 SRP151597 SRR7450902 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
9.2 SRP331960 SRR18358778 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.1 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.1 SRP092175 SRR4457251 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
9.1 ERP024350 ERR2061603 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
9.1 SRP309118 SRR13847371 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
9.1 SRP270778 SRR12165280 RNA-seq analysis of different sub-regions of developing grains in rice
9.0 SRP041468 SRR1987333 Oryza sativa Japonica Group Transcriptome or Gene expression
9.0 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
9.0 SRP115210 SRR5925500 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.0 SRP115210 SRR5925553 mRNA sequencing of whole 15 d old Oryza sativa shoots
9.0 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.0 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
9.0 SRP115210 SRR5925499 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.9 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.9 SRP181124 SRR8469624 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
8.9 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
8.9 SRP115210 SRR5925532 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.9 SRP115210 SRR5925550 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.9 SRP115210 SRR5925498 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.9 SRP049054 SRR1616169 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
8.9 SRP115210 SRR5925554 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.8 SRP115210 SRR5925497 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.8 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.8 SRP041468 SRR1985041 Oryza sativa Japonica Group Transcriptome or Gene expression
8.8 SRP356482 SRR17720813 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
8.8 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.7 SRP115210 SRR5925551 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP041468 SRR1987332 Oryza sativa Japonica Group Transcriptome or Gene expression
8.7 SRP083700 SRR4098178 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.7 SRP258176 SRR11601224 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
8.7 SRP115210 SRR5925552 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.7 SRP331960 SRR18358776 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.7 SRP151597 SRR7450901 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
8.6 SRP093884 SRR5052710 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
8.6 SRP115210 SRR5925630 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.6 SRP127575 SRR6420530 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
8.6 SRP115210 SRR5925628 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.6 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.6 SRP092175 SRR4457233 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
8.6 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.6 SRP115210 SRR5925632 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.5 SRP258176 SRR11601223 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
8.5 SRP327364 SRR15060358 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.5 SRP309118 SRR13847352 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
8.5 SRP115030 SRR5909343 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
8.5 SRP331960 SRR15411177 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.5 SRP181124 SRR8469610 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
8.5 SRP356482 SRR17720823 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
8.5 SRP356482 SRR17720820 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
8.5 SRP327364 SRR15060372 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.5 SRP115030 SRR5909345 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
8.4 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.4 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.4 SRP270778 SRR12165268 RNA-seq analysis of different sub-regions of developing grains in rice
8.4 SRP127575 SRR6420528 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
8.4 DRP000716 DRR002687 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
8.4 SRP115210 SRR5925515 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.4 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
8.4 SRP092175 SRR4457254 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
8.4 SRP220388 SRR10058417 Oryza sativa Transcriptome or Gene expression
8.4 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
8.4 SRP056884 SRR1952808 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
8.4 SRP092175 SRR4457252 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
8.3 SRP115210 SRR5925629 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP115210 SRR5925536 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP092175 SRR4457232 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
8.3 SRP083700 SRR4098186 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
8.3 SRP327364 SRR15060369 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.3 SRP357677 SRR17843167 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
8.3 SRP115210 SRR5925518 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP115210 SRR5925631 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP309118 SRR13847372 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
8.3 SRP115210 SRR5925517 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP327364 SRR15060374 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.3 SRP115210 SRR5925514 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP115210 SRR5925516 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP049054 SRR1616570 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
8.3 SRP093884 SRR5052723 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
8.3 SRP115210 SRR5925533 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.3 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
8.2 ERP013234 ERR1142056 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
8.2 SRP115210 SRR5925535 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.2 SRP115210 SRR5925534 mRNA sequencing of whole 15 d old Oryza sativa shoots
8.2 SRP170932 SRR8247769 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
8.2 SRP181124 SRR8469607 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
8.2 SRP181124 SRR8469614 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
8.2 SRP331960 SRR15411176 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
8.2 DRP000315 DRR000749 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
8.2 DRP000315 DRR000763 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
8.2 SRP041468 SRR1985046 Oryza sativa Japonica Group Transcriptome or Gene expression
8.2 SRP327364 SRR15060432 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
8.2 DRP000315 DRR000745 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
8.2 DRP000315 DRR000753 Transcriptome analysis of rice seedlings during Pi-starvation and Pi-sufficient stress
8.2 SRP356482 SRR17720819 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
8.2 SRP356482 SRR17720814 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
The output is the 100 samples with the largest contribution to the coexpression.



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