Expression viewer

Gene annotation for AT3G20395

Platform:
Species ath
Symbol AT3G20395
Function* RING/U-box superfamily protein
Entrez Gene ID* 5008015
Other ID At3g20395




Expression pattern of AT3G20395



Normalized expression
(Base-2 logarithm)
Experiment ID Sample ID Source Name in annotation
15.6 SRP220476 SRR10072715 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
15.6 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
15.6 SRP220476 SRR10072768 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
13.5 SRP267137 SRR12005775 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.9 SRP269194 SRR12108109 Mapping the transcriptional response to auxin in differentiated endodermal cells
12.4 ERP118109 ERR3624474 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.4 ERP118109 ERR3624418 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.4 ERP118109 ERR3624421 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.7 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.3 SRP311688 SRR14037524 Effect of blocking ABA-signaling in different tissues on transcriptomic changes induced by ABA-treatment
11.0 SRP126574 SRR6369354 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369407 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369448 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369501 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369507 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369513 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369525 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369527 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.0 SRP126574 SRR6369419 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.8 SRP365283 SRR18430922 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.8 SRP155742 SRR7620898 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.8 SRP051665 SRR1738116 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
10.7 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.1 SRP189792 SRR8800725 Role of AtMLKLs in response to powdery mildew fungus
9.7 SRP277943 SRR12469368 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
9.7 SRP155742 SRR7620851 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.7 SRP155742 SRR7620857 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.5 SRP371011 SRR18808283 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
9.5 SRP104119 SRR5452982 Time course of the Arabidopsis thaliana root meristem
9.4 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
9.2 SRP048829 SRR1610309 Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
9.1 SRP229078 SRR10416626 Global transcriptomic analysis of Arabidopsis thaliana ecotype Columbia-0 subjected to magnesium deficiency
9.0 SRP189792 SRR8800777 Role of AtMLKLs in response to powdery mildew fungus
8.9 SRP115534 SRR5937128 RNA-seq of genes mis-regulated in WT and the bpc1,2,3,4,6 loss-of-function mutant in response to cytokinin in roots of Arabidopsis thaliana
8.8 SRP126162 SRR6348160 Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis
8.7 SRP214325 SRR9672825 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
8.7 SRP277943 SRR12469280 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.7 SRP277943 SRR12469337 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.7 SRP277943 SRR12469364 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.7 SRP091641 SRR4426740 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.7 SRP091641 SRR4426843 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.7 SRP365283 SRR18430937 Time-series RNAseq analysis following lateral root induction by gravistimulation
8.5 SRP371011 SRR18808268 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
8.5 SRP371011 SRR18808295 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
8.5 SRP033661 SRR1046906 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
8.5 SRP033661 SRR1046914 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
8.5 SRP033661 SRR1046931 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
8.4 SRP091641 SRR4426702 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.4 SRP091641 SRR4426845 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.3 ERP116123 ERR3414829 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
8.3 SRP154321 SRR7536095 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
8.2 SRP266133 SRR11934434 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
8.1 SRP091641 SRR4426403 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.1 SRP091641 SRR4426704 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.1 SRP091641 SRR4449297 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.1 SRP100064 SRR5263207 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
8.1 SRP250052 SRR11116337 Transcriptome profiling following knockdown of NAA50 in Arabidopsis
8.0 SRP286390 SRR12773648 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
8.0 SRP286390 SRR12773651 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
7.9 SRP091641 SRR4426849 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.9 SRP366642 SRR18533287 Transcriptomic profiling of Arabidopsis primary root tips of brl3 mutant exposed to DNA damaging agent zeocin [RNA-seq]
7.9 SRP266133 SRR11934665 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
7.9 SRP100064 SRR5263205 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
7.9 SRP095010 SRR5100683 Regulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq]
7.8 ERP116123 ERR3414833 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.8 SRP155742 SRR7620854 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
7.8 SRP155742 SRR7620881 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
7.8 SRP155742 SRR7620892 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
7.8 SRP155742 SRR8699979 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
7.8 SRP100938 SRR5304727 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
7.8 SRP100938 SRR5304741 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
7.8 SRP100938 SRR5304800 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
7.7 SRP091641 SRR4426376 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.7 SRP091641 SRR4426407 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.7 SRP091641 SRR4426850 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.7 SRP091641 SRR4426977 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.7 SRP091641 SRR4449299 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.7 SRP091641 SRR4449301 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.7 SRP051665 SRR1738108 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
7.7 SRP051665 SRR1738117 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
7.7 SRP126162 SRR6348161 Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis
7.7 SRP055192 SRR1811534 Arabidopsis thaliana Raw sequence reads
7.7 SRP154321 SRR7536041 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
7.7 SRP244461 SRR10959648 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.7 SRP244461 SRR10959635 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.7 SRP244461 SRR10959657 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.7 SRP244461 SRR10959659 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.7 SRP244461 SRR10959660 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.7 SRP244461 SRR10959663 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.7 SRP279325 SRR12546095 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
7.6 SRP100064 SRR5263136 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
7.6 SRP100064 SRR5263139 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
7.6 SRP100064 SRR5263209 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
7.5 SRP148699 SRR7204052 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
7.5 SRP091641 SRR4426405 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.5 SRP091641 SRR4426701 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.5 SRP332285 SRR15427795 An Arabidopsis root phloem pole cell atlas reveals PINEAPPLE genes as transitioners to autotrophy [10x scRNA-seq]
7.5 SRP266133 SRR11934553 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
7.5 SRP266133 SRR11934437 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
7.5 SRP266133 SRR11934558 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
The output is the 100 samples with the largest contribution to the coexpression.



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