Expression viewer

Gene annotation for PD1

Platform:
Species ath
Symbol PD1
Function* prephenate dehydratase 1
Entrez Gene ID* 817329
Other ID At2g27820




Expression pattern of PD1



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.3 SRP158306 SRR7694888 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
11.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.1 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.1 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.1 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.0 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.0 SRP158306 SRR7694889 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
11.0 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.0 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.9 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.9 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.9 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.9 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.9 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.8 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.8 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.8 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.7 SRP158306 SRR7694891 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.7 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.7 SRP230790 SRR10502535 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
10.7 SRP238608 SRR10760430 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
10.7 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
10.7 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.7 SRP158306 SRR7694890 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.7 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.7 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.7 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.7 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.6 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.6 SRP126574 SRR6369439 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.6 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 SRP158306 SRR7694887 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.6 SRP277946 SRR12470195 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
10.6 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP091641 SRR4426859 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.5 SRP222258 SRR15122050 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.5 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 SRP158306 SRR7694893 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.5 SRP154099 SRR7529160 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
10.5 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.5 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
10.5 SRP158306 SRR7694897 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.5 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
10.5 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 ERP015521 ERR1406298 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.5 SRP070918 SRR3193310 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.5 SRP189792 SRR8800695 Role of AtMLKLs in response to powdery mildew fungus
10.5 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
10.4 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.4 SRP155742 SRR7620862 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.4 SRP279501 SRR12558708 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
10.4 SRP158306 SRR7694896 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.4 SRP222555 SRR10148627 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
10.4 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.4 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
10.4 SRP151348 SRR7429884 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
10.4 SRP104119 SRR5452983 Time course of the Arabidopsis thaliana root meristem
10.4 SRP201971 SRR9331161 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
10.4 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP100938 SRR5304738 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.3 SRP194106 SRR8983767 Arabidopsis thaliana 35S:ANT-GR Transcriptome
10.3 SRP154099 SRR7529175 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
10.3 SRP090457 SRR4295746 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.3 SRP169576 SRR8206656 High-throughput single-cell transcriptome profiling of plant cell types
10.3 SRP187062 SRR8645802 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
10.3 SRP154323 SRR7536247 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
10.3 SRP158306 SRR7694895 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.3 SRP100938 SRR5304800 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.3 SRP103736 SRR5440784 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.3 ERP121227 ERR4038230 Influence of CAP-D3 in Arabidopsis thaliana transcription
10.3 SRP090458 SRR4295942 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.3 SRP091641 SRR4426857 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.3 SRP090416 SRR4293717 Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered CO2 availability
10.3 SRP186254 SRR8590832 Arabidopsis ECAP is a New Adaptor Protein that Connects JAZ Repressors with TPR2 Co-repressor to Suppress Jasmonate-Responsive Anthocyanin Accumulation
10.3 SRP044776 SRR1523928 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
The output is the 100 samples with the largest contribution to the coexpression.



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