Expression viewer

Gene annotation for AT2G34510

Platform:
Species ath
Symbol AT2G34510
Function* choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Entrez Gene ID* 818014
Other ID At2g34510




Expression pattern of AT2G34510



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.9 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.8 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.8 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.7 SRP100080 SRR5264244 Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase
11.6 SRP100080 SRR5264245 Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase
11.6 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.6 SRP238086 SRR10733519 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
11.6 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.5 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.4 SRP125388 SRR6312355 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
11.4 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.3 SRP238608 SRR10760433 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
11.3 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP051763 SRR1744369 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
11.3 SRP267870 SRR12046120 Single-cell RNA-seq data of Arabidopsis root
11.3 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
11.3 SRP151058 SRR7408197 botrytisxn - Nitrogen nutrition and pathogen susceptibility: priming by metabolism.
11.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP126574 SRR6369448 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.3 SRP073711 SRR3418016 RNA-seq of abscisic acid-reponsive transcription factors
11.3 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP267870 SRR12046119 Single-cell RNA-seq data of Arabidopsis root
11.2 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.2 SRP090459 SRR4296047 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
11.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.2 SRP272650 SRR12272441 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
11.2 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP108492 SRR5642281 Identification of differentially expressed genes by RNA-seq in AtGRP7 overexpression and knockdown lines
11.2 SRP154321 SRR7536129 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
11.1 SRP154321 SRR7536128 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
11.1 SRP361760 SRR18163195 The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
11.1 SRP090913 SRR8185465 WallOmics
11.1 SRP154321 SRR7536126 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
11.1 SRP286390 SRR12773637 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
11.1 SRP097877 SRR5205635 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP125388 SRR6312366 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
11.1 ERP118500 ERR3668647 Transcription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
11.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 SRP185814 SRR8570475 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
11.0 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 SRP151039 SRR7406464 transition-Transcriptome of floral transition
11.0 SRP097877 SRR5205631 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.0 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.0 SRP151348 SRR7429896 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
11.0 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
11.0 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP154322 SRR7536161 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
11.0 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.9 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.9 SRP091641 SRR4426769 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.9 SRP315390 SRR14275131 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.9 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
10.9 SRP126574 SRR6369440 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.9 SRP126574 SRR6369500 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.9 SRP166137 SRR8078926 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
10.9 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.9 SRP238608 SRR10760432 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
10.9 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP103817 SRR5444417 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
10.9 SRP323348 SRR14766039 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
10.9 SRP315390 SRR14275132 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.9 SRP200395 SRR9200700 UVR8-mediated changes in gene expression in response to UV-B, compared to genes misexpressed in pif4pif5 mutants
10.9 SRP277946 SRR12469636 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP173766 SRR8335143 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
10.8 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.8 SRP137763 SRR6950036 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.8 SRP255966 SRR11523472 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
10.8 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.8 SRP127000 SRR6388213 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
10.8 SRP137763 SRR6950018 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
10.8 SRP091641 SRR4426767 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 SRP176451 SRR8404516 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
10.8 SRP154321 SRR7536127 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.8 SRP091641 SRR4426725 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 SRP297920 SRR13253075 Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings
10.8 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
10.8 SRP039091 SRR1179989 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
10.8 SRP103817 SRR5444416 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
10.7 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
10.7 SRP269194 SRR12108102 Mapping the transcriptional response to auxin in differentiated endodermal cells
10.7 SRP365283 SRR18430931 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.7 SRP286390 SRR12773636 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
10.7 SRP269252 SRR12110256 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
10.7 SRP156316 SRR7642980 From gene networks to network motif dynamics: how the presense of positive feed-back and -forward loops between PERIANTHIA, WUSCHEL-RELATED HOMEOBOX5 and GRF-INTERACTING FACTOR 1 modulates gene expression and function in the Arabidopsis roots.
10.7 SRP237791 SRR10704367 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
10.7 SRP371011 SRR18808275 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.7 SRP176451 SRR8404515 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
10.7 SRP200395 SRR9200701 UVR8-mediated changes in gene expression in response to UV-B, compared to genes misexpressed in pif4pif5 mutants
10.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
The output is the 100 samples with the largest contribution to the coexpression.



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