Expression viewer

Gene annotation for RHC1A

Platform:
Species ath
Symbol RHC1A
Function* RING-H2 finger C1A
Entrez Gene ID* 818680
Other ID At2g40830




Expression pattern of RHC1A



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.2 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.3 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.3 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.1 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.7 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.7 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.6 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.6 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.5 SRP051763 SRR1744362 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.5 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.5 SRP126574 SRR6369476 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 SRP126574 SRR6369468 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
10.4 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.4 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.4 SRP282437 SRR12642235 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.4 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.4 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.4 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP158306 SRR7695021 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.3 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.3 SRP237340 SRR10677246 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
10.3 SRP103817 SRR5444393 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
10.3 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.3 SRP154099 SRR7529158 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
10.3 SRP100938 SRR5304740 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.3 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
10.3 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
10.3 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
10.3 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
10.2 SRP274134 SRR12344605 Epigenetic reprogramming events rewire transcription during the alternation of generations in Arabidopsis [RNA-Seq]
10.2 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.2 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
10.2 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.2 SRP248470 SRR11075169 A dynamic network reveals the novel characteristics of miRNA regulation over time in response to the ABA hormone in Arabidopsis (mRNA)
10.2 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP110167 SRR5742223 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
10.2 SRP282437 SRR12642221 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.2 SRP108542 SRR5640559 Gene expression profiling of the Arabidopsis glucosinolate deficient mutants, ref5-1 and ref2-1 and med5 mutants
10.2 SRP103736 SRR5440784 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.2 ERP116123 ERR3414914 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 SRP173766 SRR8335143 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
10.2 SRP059744 SRR2072729 Identification of mRNAs Regulated in Response to Transcriptional Activation of the Arabidopsis ABA INSENSITIVE GROWTH 1 (ABIG1) Transcription Factor cDNA
10.2 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
10.2 SRP091641 SRR4449320 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.2 SRP220476 SRR10072748 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.2 ERP116123 ERR3414913 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 SRP253436 SRR11356191 Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions
10.2 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP101965 SRR5346192 Salicylic acid-dependent and -independent transcriptome changes in response to methyl-erythritol cyclodiphosphate accumulation
10.2 SRP189792 SRR8800760 Role of AtMLKLs in response to powdery mildew fungus
10.2 SRP220476 SRR10072750 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.2 SRP201971 SRR9331196 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
10.2 SRP238086 SRR10733509 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
10.1 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.1 SRP101641 SRR5330633 Chloroplast signalling gates thermotolerance in Arabidopsis
10.1 SRP234996 SRR10603595 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.1 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP158306 SRR7695022 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.1 SRP065316 SRR2828722 Correlative Controls of Seeds over Maternal Growth and Senescence in Arabidopsis
10.1 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
10.1 SRP118634 SRR6059769 Comparison between ethylene signaling regulated transcriptome with glucose-TOR or glucose-HXK1 regulated transcriptome
10.1 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP091641 SRR4449327 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.1 SRP220476 SRR10072751 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.1 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.1 SRP090913 SRR8185442 WallOmics
10.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.1 SRP149815 SRR7266250 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
10.1 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.1 ERP118109 ERR3624456 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.1 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP362193 SRR18206611 Transcriptome analyses of Pst DC3000-inoculated Arabidopsis thaliana Col-0 and 35S::CBP60g plants at normal and elevated temperature
10.1 SRP108634 SRR5646716 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
10.0 SRP193460 SRR8944863 Selective egg cell polyspermy bypasses the triploid block
10.0 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
The output is the 100 samples with the largest contribution to the coexpression.



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