Expression viewer

Gene annotation for UBP5

Platform:
Species ath
Symbol UBP5
Function* ubiquitin-specific protease 5
Entrez Gene ID* 818691
Other ID At2g40930




Expression pattern of UBP5



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.5 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP166137 SRR8078926 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
10.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.4 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.2 SRP282437 SRR12642156 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.1 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.0 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.0 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
10.0 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.0 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.0 SRP282437 SRR12642163 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.0 SRP052858 SRR1773555 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
10.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
9.9 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.9 SRP218723 SRR9995099 Plant 22-nt siRNAs mediate translational repression and stress adaptation
9.9 SRP266133 SRR11934487 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.9 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP041308 SRR1257406 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
9.9 SRP149815 SRR7266073 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
9.9 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.9 SRP277946 SRR12470057 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.9 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.9 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.8 SRP282437 SRR12642155 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.8 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.8 ERP015521 ERR1406293 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.8 SRP090913 SRR8185442 WallOmics
9.8 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
9.8 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP282437 SRR12642160 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.8 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
9.8 SRP081055 SRR4010828 Temperature induced alternative splicing is affected in sdg8 and sdg26.
9.8 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP271641 SRR12211735 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
9.8 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.8 SRP282437 SRR12642164 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.8 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP266133 SRR11934527 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.8 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP282437 SRR12642161 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.7 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.7 SRP277943 SRR12469378 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
9.7 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.7 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
9.7 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
9.7 SRP158306 SRR7694721 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.7 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.7 SRP090913 SRR8185474 WallOmics
9.7 SRP214607 SRR9682400 Lipophilic-Signals Lead to Organ-Specific Gene Expression Changes in Arabidopsis Seedlings
9.7 SRP351690 SRR17281225 Somatic DNA demethylation generates tissue-specific methylation states and impacts flowering time [RNA-seq]
9.7 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
9.7 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
9.7 SRP017386 SRR627631 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.7 SRP149815 SRR7267228 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
9.7 SRP267998 SRR12054301 RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis
9.7 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP267870 SRR12046059 Single-cell RNA-seq data of Arabidopsis root
9.6 SRP154323 SRR7536247 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
9.6 SRP277946 SRR12470209 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP126574 SRR6369490 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.6 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
9.6 SRP101965 SRR5346192 Salicylic acid-dependent and -independent transcriptome changes in response to methyl-erythritol cyclodiphosphate accumulation
9.6 SRP127000 SRR7750510 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
9.6 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
9.6 SRP051513 SRR1734308 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
9.6 SRP090458 SRR4295942 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.6 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.6 SRP254994 SRR11470430 Transcriptome analysis of mutations in plant nuclear membrane proteins PNET2A/B/C
The output is the 100 samples with the largest contribution to the coexpression.



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