Expression viewer

Gene annotation for AT2G41410

Platform:
Species ath
Symbol AT2G41410
Function* Calcium-binding EF-hand family protein
Entrez Gene ID* 818739
Other ID At2g41410




Expression pattern of AT2G41410



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.2 SRP114806 SRR5894723 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
14.2 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
13.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.6 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.4 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
13.3 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
13.2 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.1 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
13.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.9 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
12.9 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.9 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.8 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 SRP041308 SRR1257405 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
12.8 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.8 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
12.8 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.7 SRP323348 SRR14766042 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
12.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.6 SRP311462 SRR14022148 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
12.6 SRP331164 SRR15347022 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
12.6 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
12.6 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.5 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.5 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
12.5 SRP100938 SRR5304740 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
12.5 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.5 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 SRP114806 SRR5894422 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
12.5 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.5 ERP015521 ERR1406281 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
12.5 SRP246179 SRR10991451 Search for mitochondrial editing defect in an Arabidopsis PPR mutant
12.5 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.5 SRP158306 SRR7694876 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
12.4 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.4 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
12.4 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
12.4 SRP158306 SRR7694900 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
12.4 SRP237340 SRR10677221 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
12.4 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 SRP097877 SRR5205726 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.4 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
12.4 SRP090913 SRR8185487 WallOmics
12.4 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.4 SRP093765 SRR5045301 Transcriptome analysis after IAA paste application on pin1 mutant inflorescence meristems
12.4 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 SRP052276 SRR1760198 Arabidopsis thaliana Transcriptome or Gene expression
12.4 SRP128639 SRR6456399 Transcriptome analysis of isoxaben-induced loss of cell wall integrity in Arabidopsis seedling liquid culture
12.3 SRP222555 SRR10148650 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
12.3 SRP158306 SRR7694877 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
12.3 SRP282437 SRR12642235 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
12.3 SRP073711 SRR3418027 RNA-seq of abscisic acid-reponsive transcription factors
12.3 SRP058628 SRR2037347 Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems.
12.3 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.3 SRP269252 SRR12110258 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
12.3 SRP199288 SRR9113128 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
12.3 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.3 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP100933 SRR5304253 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
12.3 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP126574 SRR6369473 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.3 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
12.3 SRP334993 SRR15679185 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes
12.3 SRP214076 SRR9666136 Comparative transcriptome analysis of melatonin or auxin treated-Arabidopsis
12.3 SRP051665 SRR1738138 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
12.3 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
12.2 SRP201971 SRR9331187 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
12.2 SRP100938 SRR5304741 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
12.2 SRP017386 SRR627686 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.2 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 SRP158306 SRR7694961 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
12.2 SRP163443 SRR7963972 RNAseq analysis of Arabidopsis to test for gene expression in response to low CO2 concentration
12.2 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
12.2 SRP230790 SRR10502561 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
12.2 SRP098906 SRR5231013 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
12.2 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.2 SRP154322 SRR7536161 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
12.2 SRP154323 SRR7536267 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
12.2 SRP090458 SRR4295886 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
12.2 SRP071947 SRR3234388 Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I]
12.2 SRP246871 SRR11004646 half_edit - A new predictive method for E+ PPR binding
12.2 SRP093766 SRR5045312 Transcriptomic analysis of dorso-ventral cell-types of Arabidopsis shoot apical meristem
12.2 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
12.2 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 SRP126574 SRR6369468 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.2 SRP277943 SRR12469378 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
12.2 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
12.2 SRP101641 SRR5330633 Chloroplast signalling gates thermotolerance in Arabidopsis
12.2 SRP017386 SRR627680 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.2 SRP239091 SRR10804744 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
12.2 SRP304983 SRR13646711 Transcriptome in WT Col-0 and mik2-1 mutant upon SCOOP12 treatment.
The output is the 100 samples with the largest contribution to the coexpression.



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