Expression viewer

Gene annotation for LACS1

Platform:
Species ath
Symbol LACS1
Function* AMP-dependent synthetase and ligase family protein
Entrez Gene ID* 819337
Other ID At2g47240




Expression pattern of LACS1



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
13.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.1 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.5 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.2 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
12.0 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
11.7 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP148699 SRR7204060 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
11.7 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.6 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.4 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 SRP169564 SRR8206379 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.4 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
11.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.4 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.4 SRP126156 SRR6347965 Equal parental contribution to the transcriptome is not equal control of embryogenesis
11.4 SRP218253 SRR9962025 Cell lineage-specific transcriptome analysis for interpreting cell fate specification of proembryos
11.3 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP371011 SRR18808229 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
11.3 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
11.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.3 SRP041308 SRR1257406 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
11.2 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 SRP154322 SRR7536161 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
11.2 SRP017386 SRR627674 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.1 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP199288 SRR9113158 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.1 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP267870 SRR12046066 Single-cell RNA-seq data of Arabidopsis root
11.0 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
11.0 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
11.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP244461 SRR10959635 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
11.0 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
11.0 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP267870 SRR12046065 Single-cell RNA-seq data of Arabidopsis root
10.9 SRP277946 SRR12470198 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP081055 SRR4010828 Temperature induced alternative splicing is affected in sdg8 and sdg26.
10.9 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP222258 SRR15122077 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.8 SRP315390 SRR14275131 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.8 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
10.8 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.8 SRP007484 SRR309185 Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions
10.8 SRP091641 SRR4426707 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 SRP044776 SRR1523939 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
10.8 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
10.8 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
10.8 SRP049993 SRR1655117 Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
10.8 SRP266133 SRR11934585 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.8 SRP150771 SRR7357987 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
10.8 SRP149815 SRR7266073 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
10.8 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.8 SRP136817 SRR6919899 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq gIR vs mock wt]
10.8 SRP365283 SRR18430931 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.8 SRP136641 SRR6908926 Gene expression profiling (RNA-seq) in wild-type and bdrs triple mutant Arabidopsis seedlings in response to light or to a heat shock
10.7 SRP055192 SRR1811543 Arabidopsis thaliana Raw sequence reads
10.7 SRP251062 SRR11206331 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.7 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
10.7 SRP186316 SRR8592601 PRC2-mediated H3K27me3 contributes to transcriptional regulation of FIT-mediated iron deficiency response
10.7 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP169564 SRR8206369 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.7 SRP127000 SRR7750510 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
10.7 SRP114806 SRR5894653 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.7 SRP150771 SRR7357985 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
10.7 SRP188810 SRR8749820 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
10.7 SRP169564 SRR8206390 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.7 SRP326522 SRR15015716 Cell-wall damage activates DOF transcription factors to promote wound healing and tissue regeneration in Arabidopsis thaliana
10.7 SRP097877 SRR5205631 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.7 SRP063017 SRR2221835 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.7 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.7 SRP052302 SRR1761508 mRNA-seq of ros1-3 and ros1-4 with ABA treatment
10.7 SRP090457 SRR4295746 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.7 SRP090458 SRR4295873 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.6 SRP031626 SRR1013891 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.6 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.6 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.6 SRP074485 SRR3480189 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
10.6 SRP168408 SRR8181145 miR167 limits anther growth to potentiate anther dehiscence
10.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.6 SRP125388 SRR6312304 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.6 SRP063017 SRR2221843 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.6 SRP222258 SRR15122050 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.6 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP102178 SRR5360863 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.6 SRP035269 SRR1105598 RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids
The output is the 100 samples with the largest contribution to the coexpression.



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