Expression viewer

Gene annotation for AT3G10080

Platform:
Species ath
Symbol AT3G10080
Function* RmlC-like cupins superfamily protein
Entrez Gene ID* 820169
Other ID At3g10080




Expression pattern of AT3G10080



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.6 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.5 SRP114806 SRR5894723 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.3 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.3 SRP021196 SRR1610503 RNA-Seq of single cells from the Arabidopsis root
11.1 SRP267137 SRR12005770 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.9 SRP267137 SRR12005775 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.8 SRP267137 SRR12005779 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP234996 SRR10603563 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.5 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.3 SRP100938 SRR5304741 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.3 SRP126156 SRR6347967 Equal parental contribution to the transcriptome is not equal control of embryogenesis
10.3 SRP126156 SRR6347964 Equal parental contribution to the transcriptome is not equal control of embryogenesis
10.3 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.2 SRP155742 SRR7620906 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
10.1 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP234996 SRR10603562 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.0 SRP158306 SRR7695022 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.0 SRP164718 SRR7985406 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
10.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.9 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.9 SRP100938 SRR5304738 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
9.9 SRP297585 SRR13239290 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
9.9 SRP155742 SRR7620890 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.9 SRP155742 SRR7620894 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.9 SRP155742 SRR7620895 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.9 SRP155742 SRR7620917 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.8 SRP100938 SRR5304727 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
9.8 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP276408 SRR12401353 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
9.7 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.7 SRP100938 SRR5304740 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
9.7 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP151817 SRR7465450 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
9.6 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
9.6 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.6 SRP055192 SRR1811536 Arabidopsis thaliana Raw sequence reads
9.6 SRP158306 SRR7695021 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.6 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.6 SRP126574 SRR6369439 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.5 SRP158306 SRR7694876 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.5 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.5 SRP126574 SRR6369497 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.5 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.5 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
9.5 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.5 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.5 SRP223015 SRR10166253 Targeted reprogramming of H3K27me3 resets epigenetic memory in plant paternal chromatin [mature pollen]
9.5 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.5 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
9.5 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.5 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.5 SRP288594 SRR12899073 Transcriptional response of A. thaliana Root and Shoot tissue to light stress and presence of microbial communities in myc2-3 and MYC2-Flag lines
9.5 SRP351690 SRR17281225 Somatic DNA demethylation generates tissue-specific methylation states and impacts flowering time [RNA-seq]
9.4 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.4 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP158306 SRR7695026 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.4 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.4 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
9.4 SRP164718 SRR7985424 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
9.4 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP065316 SRR2828728 Correlative Controls of Seeds over Maternal Growth and Senescence in Arabidopsis
9.4 SRP155742 SRR7620860 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.4 SRP155742 SRR7620882 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.4 SRP155742 SRR7620909 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.4 SRP155742 SRR7620912 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.4 SRP155742 SRR8699970 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.4 ERP123539 ERR4471617 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.4 SRP154323 SRR7536246 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
9.3 SRP090458 SRR4295893 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.3 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
9.3 SRP158306 SRR7695024 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.3 SRP276408 SRR12401354 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
9.3 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.3 SRP151817 SRR7465447 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
9.3 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP282437 SRR12642219 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.2 SRP100712 SRR5285841 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
9.2 SRP098906 SRR5231011 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
9.2 SRP218253 SRR9962025 Cell lineage-specific transcriptome analysis for interpreting cell fate specification of proembryos
9.2 SRP158306 SRR7694888 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.2 SRP017386 SRR627631 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.2 SRP281951 SRR12620989 RNA-Seq experiment on Arabidopsis seedlings regarding SLIM1 and EIL1 function at low S
9.2 SRP097877 SRR5205631 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
9.2 SRP090458 SRR4295886 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.2 SRP282437 SRR12642182 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.2 SRP267137 SRR12005756 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
9.2 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP158306 SRR7694878 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.2 SRP158306 SRR7695020 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.2 SRP058628 SRR2037363 Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems.
The output is the 100 samples with the largest contribution to the coexpression.



The preparation time of this page was 0.2 [sec].