Expression viewer

Gene annotation for AT3G10190

Platform:
Species ath
Symbol AT3G10190
Function* Calcium-binding EF-hand family protein
Entrez Gene ID* 820181
Other ID At3g10190




Expression pattern of AT3G10190



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.7 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP357889 SRR17847298 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
10.1 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.9 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
9.9 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.8 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.7 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP097877 SRR5205619 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
9.5 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.5 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.5 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.5 SRP230790 SRR10502561 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
9.4 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP021196 SRR1610507 RNA-Seq of single cells from the Arabidopsis root
9.4 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.4 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
9.3 SRP214076 SRR9666136 Comparative transcriptome analysis of melatonin or auxin treated-Arabidopsis
9.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.3 SRP132408 SRR6684450 Direct control of SPEECHLESS by PIF4 in the high temperature response of stomatal development
9.3 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
9.2 SRP097877 SRR5205673 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP073485 SRR3401824 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
9.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.2 SRP136641 SRR6908911 Gene expression profiling (RNA-seq) in wild-type and bdrs triple mutant Arabidopsis seedlings in response to light or to a heat shock
9.2 SRP114806 SRR5894723 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.2 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
9.2 SRP253507 SRR11359751 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
9.1 SRP311462 SRR14022148 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
9.1 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.1 SRP282437 SRR12642161 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 SRP282437 SRR12642160 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.1 SRP286047 SRR12762102 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
9.1 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.1 SRP246871 SRR11004646 half_edit - A new predictive method for E+ PPR binding
9.1 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.1 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.0 SRP220476 SRR10072715 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.0 SRP114806 SRR5894390 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.0 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP136812 SRR6919650 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
9.0 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.0 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP114806 SRR5894402 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.9 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
8.9 SRP220476 SRR10072716 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
8.9 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
8.9 SRP277946 SRR12469855 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP103817 SRR5444455 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
8.9 SRP103817 SRR5444456 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
8.9 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
8.9 SRP074436 SRR3478328 Arabidopsis thaliana treatments to trigger somatic embryo formation under RNAseq
8.9 SRP102178 SRR5360864 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.9 SRP018003 SRR649740 Allele-specific expression in A. thaliana hybrids grown under control and drought stress conditions
8.9 SRP058628 SRR2037363 Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems.
8.9 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
8.8 SRP090459 SRR4295974 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
8.8 SRP327928 SRR15100972 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
8.8 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
8.8 SRP199288 SRR9113132 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
8.8 SRP049951 SRR1654366 Transcriptional response to zebularine and mitomycin C (MMC) in wild type and ATR deficient Arabidopsis thaliana plants
8.8 SRP102178 SRR5360794 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.8 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.8 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
8.8 SRP090458 SRR4295942 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.8 SRP090459 SRR4295976 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
8.8 SRP044776 SRR1523884 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
8.8 SRP252640 SRR11300791 XPO4 negatively regulates immune activation in the cpr5 mutant
8.8 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
8.8 SRP271641 SRR12211733 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
8.8 SRP090458 SRR4295893 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.8 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
8.8 SRP137763 SRR6950031 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
8.8 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP168408 SRR8181129 miR167 limits anther growth to potentiate anther dehiscence
8.8 SRP114806 SRR5894567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.8 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
8.8 SRP282437 SRR12642159 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
8.8 SRP136817 SRR6919901 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq gIR vs mock wt]
8.7 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
8.7 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
8.7 SRP126574 SRR6369475 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.7 SRP189895 SRR8816112 Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS
8.7 ERP106738 ERR2286753 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
8.7 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.7 SRP154321 SRR7535964 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
8.7 SRP102178 SRR5360780 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.7 SRP201666 SRR9313211 Chimeric activators and repressors define HY5 activity and a feedback control mechanism in Arabidopsis (HY5_RNAseq)
The output is the 100 samples with the largest contribution to the coexpression.



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