Expression viewer

Gene annotation for MSR1

Platform:
Species ath
Symbol MSR1
Function* O-fucosyltransferase family protein
Entrez Gene ID* 821672
Other ID At3g21190




Expression pattern of MSR1



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.6 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.0 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.8 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP133702 SRR6793602 Singlet oxygen induced RNA oxidation and translational arrest [DCMU]
10.8 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.6 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.6 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.6 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.6 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.6 SRP267328 SRR12014792 Transcriptome analysis of Arabidopsis thaliana roots, H2O2 and Rose Bengal [20180920_173313_H2O2_RB]
10.6 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.5 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
10.5 SRP051763 SRR1744360 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.5 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP073379 SRR3393592 Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization
10.4 SRP114806 SRR5894628 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.4 SRP189792 SRR8800756 Role of AtMLKLs in response to powdery mildew fungus
10.4 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.3 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.3 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.3 SRP277946 SRR12470183 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP133703 SRR6793619 Singlet oxygen induced RNA oxidation and translational arrest [CHX]
10.3 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.3 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP041308 SRR1257406 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
10.3 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.2 SRP255966 SRR11523452 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
10.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.2 ERP015521 ERR1406298 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.2 SRP188270 SRR8717650 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
10.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.2 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.2 SRP097877 SRR5205644 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.1 SRP315390 SRR14275130 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
10.1 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.1 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP188270 SRR8717652 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
10.1 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.1 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
10.1 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.0 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.0 SRP238842 SRR10769009 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
10.0 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP194106 SRR8983767 Arabidopsis thaliana 35S:ANT-GR Transcriptome
10.0 SRP201971 SRR9331196 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
10.0 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
10.0 SRP033661 SRR1046912 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
10.0 SRP029598 SRR976160 Arabidopsis thaliana Transcriptome under Salt Stress
10.0 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
10.0 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
10.0 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.0 SRP189895 SRR8816078 Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS
10.0 SRP114806 SRR5894525 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 SRP081055 SRR4010828 Temperature induced alternative splicing is affected in sdg8 and sdg26.
10.0 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP188270 SRR8717649 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
9.9 SRP115958 SRR5956436 Plant abiotic stress tolerance conferred by the desert endophytic bacterium Enterobacter sp. SA187 is mediated through enhanced ethylene signalling
9.9 SRP188270 SRR8717651 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
9.9 SRP277946 SRR12470195 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.9 SRP365415 SRR18441283 Transcriptome profiling of Arabidopsis roots upon lateral root induction in WT and TOR knock down [dataset1]
9.9 ERP115136 ERR3310296 RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h)
9.9 SRP214325 SRR9672817 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
9.9 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP315390 SRR14275131 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
9.9 SRP151817 SRR7465414 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
9.9 SRP327928 SRR15100972 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
9.9 SRP282437 SRR12642156 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.9 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
9.9 SRP033023 SRR1030244 Analysis of the RDR6-dependent ein5 ski2 transcriptome profile in Arabidopsis
9.9 SRP315390 SRR14275129 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
9.8 SRP277946 SRR12470202 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.8 SRP357889 SRR17847289 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
9.8 SRP017386 SRR627631 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.8 SRP315390 SRR14275132 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
9.8 SRP108634 SRR5646725 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
9.8 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.8 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP285380 SRR12712258 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
9.8 SRP090457 SRR4295746 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
9.8 SRP222555 SRR10148627 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
The output is the 100 samples with the largest contribution to the coexpression.



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