Expression viewer

Gene annotation for MAD2

Platform:
Species ath
Symbol MAD2
Function* DNA-binding HORMA family protein
Entrez Gene ID* 822195
Other ID At3g25980




Expression pattern of MAD2



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 SRP114806 SRR5894687 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.9 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.9 SRP169564 SRR8206426 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
9.6 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.5 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
9.5 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.5 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.3 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
9.3 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.3 SRP136269 SRR6880723 Cold priming and triggering of Arabidopsis accessions
9.3 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
9.2 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.2 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
9.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
9.1 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.1 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
9.1 SRP114806 SRR5894725 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.0 SRP244078 SRR10953372 Conserved Arabidopsis response to oviposition and crude egg extract treatment
9.0 SRP021196 SRR1610479 RNA-Seq of single cells from the Arabidopsis root
9.0 SRP082532 SRR4048238 WRKY transcription factors in early MAMP-triggered immunity (RNA-Seq)
9.0 SRP267137 SRR12005744 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
8.9 SRP073379 SRR3393592 Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization
8.9 SRP093697 SRR5038606 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or BTH
8.9 SRP133702 SRR6793604 Singlet oxygen induced RNA oxidation and translational arrest [DCMU]
8.9 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
8.9 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.9 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
8.9 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.9 SRP021196 SRR1610480 RNA-Seq of single cells from the Arabidopsis root
8.9 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
8.9 SRP238842 SRR10769016 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
8.9 SRP237340 SRR10677203 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
8.9 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.9 SRP103736 SRR5440843 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.9 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
8.8 SRP097877 SRR5205727 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.8 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.8 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP126574 SRR6369468 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.8 SRP311610 SRR14028771 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.8 SRP364996 SRR18394845 Comparison of the effect of induction of AtGDU1 and the constitutive over-expression of the AtGDU genes on the transcriptome of Arabidopsis thaliana
8.8 SRP114806 SRR5894551 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.8 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP187477 SRR8667497 A role for PICKLE in the regulation of cold stress response in Arabidopsis
8.8 SRP306749 SRR14009247 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
8.8 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
8.8 SRP100938 SRR5304920 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
8.7 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
8.7 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
8.7 SRP112501 SRR5831030 Combining chemical and genetic approaches to increase drought resistance in plants
8.7 SRP199288 SRR9113149 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
8.7 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
8.6 SRP201662 SRR9312955 Tissue specific light response during Arabidopsis de-etiolation
8.6 SRP277946 SRR12470195 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP169564 SRR8206425 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
8.6 SRP331164 SRR15347021 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
8.6 SRP098795 SRR5227417 RNA-seq data over Arabidopsis thaliana germination
8.6 SRP126574 SRR6369476 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.6 SRP200395 SRR9200678 UVR8-mediated changes in gene expression in response to UV-B, compared to genes misexpressed in pif4pif5 mutants
8.6 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
8.6 SRP154321 SRR7535982 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
8.5 SRP114806 SRR5894556 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.5 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.5 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.5 SRP365283 SRR18430931 Time-series RNAseq analysis following lateral root induction by gravistimulation
8.5 SRP237791 SRR10704365 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
8.5 SRP318409 SRR14418082 Interplay between gene expression, histone modifications, and DNA methylation mediated by miR778 during beet cyst nematode parasitism of Arabidopsis [RNA-seq]
8.5 SRP311610 SRR14028768 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.5 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.5 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
8.5 SRP327928 SRR15100972 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
8.5 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.5 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.5 SRP065450 SRR2850580 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
8.5 SRP188810 SRR8749793 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
8.5 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.5 SRP033660 SRR1046869 Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions
8.4 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.4 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP188270 SRR8717650 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
8.4 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.4 SRP267870 SRR12046124 Single-cell RNA-seq data of Arabidopsis root
8.4 SRP158306 SRR7695022 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
8.4 SRP246871 SRR11004657 half_edit - A new predictive method for E+ PPR binding
8.4 SRP267137 SRR12005743 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
8.4 SRP188270 SRR8717652 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
8.4 SRP119267 SRR6217812 RNA-Seq analysis comparing gene expression changes between Col-0 wild-type (WT) and sig2-2 mutant lines at the whole genome level
8.4 SRP098795 SRR5227415 RNA-seq data over Arabidopsis thaliana germination
8.4 SRP126574 SRR6369414 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.4 SRP230790 SRR10502580 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
8.4 SRP311688 SRR14037517 Effect of blocking ABA-signaling in different tissues on transcriptomic changes induced by ABA-treatment
8.4 SRP126162 SRR6348170 Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis
8.4 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
The output is the 100 samples with the largest contribution to the coexpression.



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