Expression viewer

Gene annotation for LBD38

Platform:
Species ath
Symbol LBD38
Function* LOB domain-containing protein 38
Entrez Gene ID* 824156
Other ID At3g49940




Expression pattern of LBD38



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
13.9 SRP155742 SRR7620919 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.6 SRP155742 SRR7620909 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.6 SRP155742 SRR7620914 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.3 SRP114806 SRR5894723 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.7 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.1 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.0 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
12.0 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 SRP097877 SRR5205721 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.0 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.9 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.9 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
11.7 SRP199288 SRR9113095 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.7 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.5 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
11.5 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.5 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 SRP091641 SRR4426958 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.4 SRP277946 SRR12469855 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.4 SRP126574 SRR6369500 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.4 SRP100938 SRR5304727 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.3 SRP091641 SRR4426956 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.3 SRP154323 SRR7536248 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
11.3 SRP294484 SRR13156754 Functional convergence of growth responses to shade and warmth in Arabidopsis
11.3 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
11.3 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.3 SRP100938 SRR5304738 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.3 SRP162520 SRR7899141 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
11.3 SRP154323 SRR7536246 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
11.3 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.3 SRP324081 SRR14813632 ARATH-IN-OUT
11.3 SRP362867 SRR18254742 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
11.2 SRP127000 SRR6388213 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
11.2 SRP091641 SRR4426954 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP267137 SRR12005733 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
11.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.2 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP114806 SRR5894687 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.2 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP189792 SRR8800760 Role of AtMLKLs in response to powdery mildew fungus
11.1 SRP095390 SRR5121378 Induced one gene overexpression and check the transcriptional expression
11.1 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
11.1 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.1 SRP110167 SRR5742210 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
11.1 SRP017386 SRR627674 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.1 SRP136641 SRR6908926 Gene expression profiling (RNA-seq) in wild-type and bdrs triple mutant Arabidopsis seedlings in response to light or to a heat shock
11.1 SRP114806 SRR5894422 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.1 SRP161596 SRR7822662 Identification of regulators of vascular proliferation
11.1 SRP199288 SRR9113151 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.1 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.1 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
11.1 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
11.0 SRP212098 SRR9602181 Gene expression profiling study by RNA-seq for identifying genes associated with sound vibration in plant
11.0 SRP311462 SRR14022148 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
11.0 SRP091641 SRR4426369 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.0 SRP050945 SRR1696858 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
11.0 SRP188809 SRR8749772 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin, card1-1 mutant (WT-expressing aequorin background), card1-2 mutant (WT-expressing aequorin background) in response to 10 minute DMBQ or DMSO treatment
11.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP154323 SRR7536247 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
11.0 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP090458 SRR4295843 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.0 SRP187477 SRR8667497 A role for PICKLE in the regulation of cold stress response in Arabidopsis
11.0 ERP118109 ERR3624341 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.9 SRP100938 SRR5304741 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 SRP093766 SRR5045312 Transcriptomic analysis of dorso-ventral cell-types of Arabidopsis shoot apical meristem
10.9 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.9 SRP267137 SRR12005728 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.9 SRP277946 SRR12470058 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP091641 SRR4426859 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.9 SRP052302 SRR1761508 mRNA-seq of ros1-3 and ros1-4 with ABA treatment
10.9 SRP081056 SRR4010840 Temperature induced changes in the Arabidopsis transcriptome
10.9 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
10.9 SRP091641 SRR4426365 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.9 SRP161596 SRR7822661 Identification of regulators of vascular proliferation
10.9 SRP091641 SRR4426942 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.9 SRP185814 SRR8570505 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
10.9 SRP154323 SRR7536249 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
10.9 SRP277946 SRR12469863 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.9 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.8 SRP026541 SRR926197 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
10.8 SRP100938 SRR5304740 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.8 SRP277946 SRR12469845 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
10.8 SRP277946 SRR12469637 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.8 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
The output is the 100 samples with the largest contribution to the coexpression.



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