Expression viewer

Gene annotation for AT3G51390

Platform:
Species ath
Symbol AT3G51390
Function* DHHC-type zinc finger family protein
Entrez Gene ID* 824302
Other ID At3g51390




Expression pattern of AT3G51390



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
9.3 SRP286312 SRR12770093 HEC regulation at high ambient temperature gene expression in Arabidopsis thaliana
8.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.7 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.7 SRP071947 SRR3234398 Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I]
8.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
8.5 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
8.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.4 SRP285868 SRR12746025 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
8.4 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP219510 SRR10030480 RNA-seq analysis of D-tagatose-treated Arabidopsis thaliana inoculated with Hyaloperonospora arabidopsidis isolate Noco-2
8.4 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.4 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP155742 SRR7620862 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
8.4 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
8.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
8.3 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
8.3 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.3 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.3 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
8.3 SRP133703 SRR6793623 Singlet oxygen induced RNA oxidation and translational arrest [CHX]
8.3 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.2 SRP371011 SRR18808229 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
8.2 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP151348 SRR7429858 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
8.1 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
8.1 SRP269503 SRR12125016 Transcriptional responses of wild-type and abr1 mutant Arabidopsis plants to infection with Pseudomonas syringae
8.1 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
8.1 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.1 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
8.1 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.1 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP277946 SRR12470057 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP285868 SRR12746014 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
8.1 SRP285868 SRR12746027 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
8.0 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.0 SRP052858 SRR1773555 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
8.0 SRP133702 SRR6793612 Singlet oxygen induced RNA oxidation and translational arrest [DCMU]
8.0 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
8.0 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
8.0 SRP277946 SRR12469855 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
8.0 SRP155742 SRR7620861 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
8.0 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
8.0 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.0 SRP090458 SRR4295942 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.0 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
8.0 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.0 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
7.9 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
7.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP244461 SRR10959655 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
7.9 SRP277946 SRR12469845 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP222258 SRR15122070 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
7.9 SRP050945 SRR1696858 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
7.9 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
7.9 SRP100938 SRR5304767 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
7.9 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
7.8 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.8 SRP065450 SRR2850584 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
7.8 SRP220476 SRR10072665 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
7.8 SRP201971 SRR9331194 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
7.8 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
7.8 SRP090458 SRR4295857 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
7.8 SRP255966 SRR11523452 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
7.8 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
7.8 SRP277943 SRR12469378 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
7.8 SRP108535 SRR5640164 Exploring the link between ER stress and autophagy in Arabidopsis
7.8 SRP100938 SRR5304785 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
7.8 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
7.8 SRP154099 SRR7529179 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
7.8 SRP159259 SRR7774148 Diel and circadian gating of Arabidopsis thermotolerance and transcriptional response to heat stress.
7.8 SRP108542 SRR5640553 Gene expression profiling of the Arabidopsis glucosinolate deficient mutants, ref5-1 and ref2-1 and med5 mutants
7.8 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
7.8 ERP118109 ERR3624326 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
7.8 SRP267330 SRR12014828 Transcriptome analysis of Arabidopsis thaliana shoots and roots, exposed to PEG-induced osmotic shock, PEG+Histidine, PEG+SHAM [20190311_172119_Peg_SHAMf1_res]
7.8 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.8 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.7 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
7.7 SRP286187 SRR12764914 The mRNA expression profiles of the hypocotyl and root in WT and hy5
7.7 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
7.7 SRP090457 SRR4295764 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
7.7 SRP187455 SRR8666091 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
7.7 SRP222258 SRR15122048 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
7.7 SRP101965 SRR5346192 Salicylic acid-dependent and -independent transcriptome changes in response to methyl-erythritol cyclodiphosphate accumulation
7.7 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.7 SRP277946 SRR12470081 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.7 ERP015521 ERR1406298 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
The output is the 100 samples with the largest contribution to the coexpression.



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