Expression viewer

Gene annotation for MEE40

Platform:
Species ath
Symbol MEE40
Function* Pentatricopeptide repeat (PPR) superfamily protein
Entrez Gene ID* 824537
Other ID At3g53700




Expression pattern of MEE40



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.6 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.8 SRP234996 SRR10603595 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.7 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.6 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.4 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.3 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
10.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.2 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.2 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.1 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.1 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.1 SRP021196 SRR1610484 RNA-Seq of single cells from the Arabidopsis root
10.1 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.1 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.0 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.0 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP351690 SRR17281225 Somatic DNA demethylation generates tissue-specific methylation states and impacts flowering time [RNA-seq]
10.0 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.9 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.9 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.9 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.9 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.8 SRP144164 SRR7087359 The KNOXI gene SHOOT MERISTEMLESS regulates floral fate in Arabidopsis
9.8 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
9.8 SRP311462 SRR14022148 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
9.8 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP154323 SRR7536247 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
9.8 SRP126574 SRR6369439 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.8 SRP173235 SRR8310098 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
9.7 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.7 SRP220476 SRR10072780 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.7 SRP051763 SRR1744360 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.7 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP059744 SRR2072717 Identification of mRNAs Regulated in Response to Transcriptional Activation of the Arabidopsis ABA INSENSITIVE GROWTH 1 (ABIG1) Transcription Factor cDNA
9.7 SRP127000 SRR7750510 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
9.7 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP108634 SRR5646705 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
9.7 ERP015521 ERR1406293 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.7 SRP301115 SRR13397366 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
9.7 SRP090913 SRR8185474 WallOmics
9.7 SRP090913 SRR8185442 WallOmics
9.7 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
9.7 SRP065807 SRR2927350 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
9.7 SRP081055 SRR4010828 Temperature induced alternative splicing is affected in sdg8 and sdg26.
9.7 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.7 SRP052302 SRR1761508 mRNA-seq of ros1-3 and ros1-4 with ABA treatment
9.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.7 ERP116123 ERR3414771 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.6 SRP194106 SRR8983767 Arabidopsis thaliana 35S:ANT-GR Transcriptome
9.6 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
9.6 SRP187477 SRR8667497 A role for PICKLE in the regulation of cold stress response in Arabidopsis
9.6 ERP110082 ERR2715069 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
9.6 SRP222258 SRR15122050 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
9.6 SRP222258 SRR15122077 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
9.6 SRP277946 SRR12470183 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
9.6 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.6 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
9.6 SRP151817 SRR7465411 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
9.6 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.6 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.6 SRP029598 SRR976160 Arabidopsis thaliana Transcriptome under Salt Stress
9.6 SRP230790 SRR10502534 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
9.6 SRP297574 SRR13238920 mRNA profiling of Trihelix transcription factor ASIL mutants in seedlings
9.6 SRP189792 SRR8800760 Role of AtMLKLs in response to powdery mildew fungus
9.6 ERP116123 ERR3414784 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.6 SRP021196 SRR1610483 RNA-Seq of single cells from the Arabidopsis root
9.6 SRP060410 SRR2088041 Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
9.6 SRP097877 SRR5205673 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.5 ERP116123 ERR3414772 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.5 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.5 ERP116123 ERR3414783 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.5 SRP187062 SRR8645787 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
9.5 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP238842 SRR10769009 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
9.5 SRP154323 SRR7536246 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
9.5 SRP323348 SRR14766039 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
9.5 SRP098906 SRR5231011 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
9.5 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
9.5 SRP161596 SRR7822662 Identification of regulators of vascular proliferation
9.5 SRP031626 SRR1013891 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
The output is the 100 samples with the largest contribution to the coexpression.



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