Expression viewer

Gene annotation for AT3G59080

Platform:
Species ath
Symbol AT3G59080
Function* Eukaryotic aspartyl protease family protein
Entrez Gene ID* 825077
Other ID At3g59080




Expression pattern of AT3G59080



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.9 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.6 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
11.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.1 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.0 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.8 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.5 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP230790 SRR10502568 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
10.4 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.4 SRP161829 SRR7842005 Analysis of arabidopsis mutants tor/lst8/yak1/maktor
10.3 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.3 SRP222555 SRR10148650 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
10.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
10.3 SRP277946 SRR12470075 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 ERP110082 ERR2715071 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
10.1 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP346154 SRR16948976 Plants grow in lunar regolith
10.1 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP238086 SRR10733519 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
10.1 SRP097877 SRR5205635 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 SRP311688 SRR14037521 Effect of blocking ABA-signaling in different tissues on transcriptomic changes induced by ABA-treatment
10.1 ERP023227 ERR1990450 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
10.1 SRP095390 SRR5121378 Induced one gene overexpression and check the transcriptional expression
10.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP041308 SRR1257405 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
10.0 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
10.0 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.0 SRP173235 SRR8310091 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
10.0 SRP323348 SRR14766022 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
10.0 SRP082177 SRR4033020 Genome-wide mapping of the Arabidopsis thaliana heat shock transcription factor A1b binding sites under non-stress and heat stress conditions [RNA-seq]
10.0 SRP277943 SRR12469378 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
10.0 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP165975 SRR8069375 High temperature transcriptomes of mutants in HDA9, PIF4 and Col-0 wild type of young Arabidopsis seedlings
10.0 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
9.9 SRP007484 SRR309157 Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions
9.9 SRP277946 SRR12470057 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470069 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP136812 SRR6919666 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
9.9 SRP136812 SRR6919643 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
9.9 SRP051763 SRR1744369 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.9 SRP238842 SRR10769004 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
9.9 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.9 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.9 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.9 SRP214585 SRR9681278 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.8 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP331164 SRR15347022 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
9.8 SRP154321 SRR7536033 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
9.8 SRP214585 SRR9681289 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.8 SRP187455 SRR8666073 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
9.8 SRP214585 SRR9681286 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.8 SRP267870 SRR12046066 Single-cell RNA-seq data of Arabidopsis root
9.8 SRP090458 SRR4295873 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.8 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP277946 SRR12469847 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP100080 SRR5264244 Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase
9.8 ERP110082 ERR2715072 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
9.8 SRP255966 SRR11523470 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
9.8 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP100080 SRR5264245 Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase
9.8 SRP033660 SRR1046885 Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions
9.8 SRP331164 SRR15347021 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
9.8 SRP097877 SRR5205721 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.8 SRP277946 SRR12469863 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP324081 SRR14813601 ARATH-IN-OUT
9.8 SRP362867 SRR18254739 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
9.8 SRP331164 SRR15347020 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
9.7 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
9.7 SRP187455 SRR8666074 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
9.7 SRP122518 SRR6230492 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
9.7 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.7 SRP200395 SRR9200700 UVR8-mediated changes in gene expression in response to UV-B, compared to genes misexpressed in pif4pif5 mutants
9.7 SRP114806 SRR5894630 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.7 SRP214585 SRR9681288 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.7 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
9.7 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.7 SRP091641 SRR4426693 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
9.7 SRP214585 SRR9681281 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.7 SRP214585 SRR9681283 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.7 SRP090457 SRR4295751 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
9.7 SRP214585 SRR9681279 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.7 SRP301115 SRR13397402 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
9.7 SRP091641 SRR4426699 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
9.7 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.7 SRP214585 SRR9681277 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.7 SRP201971 SRR9331180 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
The output is the 100 samples with the largest contribution to the coexpression.



The preparation time of this page was 0.2 [sec].