Expression viewer

Gene annotation for AT3G60800

Platform:
Species ath
Symbol AT3G60800
Function* DHHC-type zinc finger family protein
Entrez Gene ID* 825251
Other ID At3g60800




Expression pattern of AT3G60800



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.3 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.9 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.2 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.1 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.1 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.0 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
9.8 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP324081 SRR14813597 ARATH-IN-OUT
9.8 SRP362867 SRR18254734 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
9.8 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
9.8 SRP220476 SRR10072750 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.8 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.7 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.7 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
9.7 SRP097690 SRR5197924 Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
9.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.7 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.6 SRP234996 SRR10603595 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
9.6 SRP248470 SRR11075169 A dynamic network reveals the novel characteristics of miRNA regulation over time in response to the ABA hormone in Arabidopsis (mRNA)
9.6 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
9.6 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
9.6 SRP114806 SRR5894630 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.6 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
9.6 SRP220476 SRR10072751 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.6 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP282437 SRR12642160 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.5 SRP220476 SRR10072753 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.5 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.5 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.5 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
9.5 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.5 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.5 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
9.5 SRP189792 SRR8800760 Role of AtMLKLs in response to powdery mildew fungus
9.5 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.5 SRP114806 SRR5894427 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.5 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
9.4 SRP187455 SRR8666077 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
9.4 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
9.4 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.4 SRP126162 SRR6348183 Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis
9.4 SRP090913 SRR8185442 WallOmics
9.4 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
9.4 SRP187062 SRR8645814 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
9.4 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP154321 SRR7535946 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
9.4 SRP041308 SRR1257406 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
9.4 SRP282437 SRR12642156 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.4 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP065807 SRR2927331 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
9.4 SRP154323 SRR7536246 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
9.4 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
9.4 SRP220476 SRR10072752 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.4 SRP103817 SRR5444476 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
9.4 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.4 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
9.4 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP220476 SRR10072748 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.3 SRP017386 SRR627631 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.3 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
9.3 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
9.3 SRP093766 SRR5045312 Transcriptomic analysis of dorso-ventral cell-types of Arabidopsis shoot apical meristem
9.3 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
9.3 ERP118109 ERR3624391 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.3 SRP351935 SRR17295821 Influence of the downregulation of the MARS lncRNA (AT5G00580) of the response to Abscisic acid (ABA) in Arabidopsis
9.3 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.3 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
9.3 SRP090458 SRR4295886 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.3 SRP048829 SRR1610323 Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
9.3 ERP118109 ERR3624351 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.3 SRP100938 SRR5304727 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
9.3 SRP282437 SRR12642161 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.3 SRP244736 SRR10949344 Transcriptional regulation of cell division and cytokinin response in Arabidopsis shoot apical meristem [RNA-seq]
9.3 SRP149815 SRR7267224 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
9.3 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
9.3 SRP155742 SRR7620862 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.3 SRP193460 SRR8944866 Selective egg cell polyspermy bypasses the triploid block
9.3 SRP251507 SRR11235139 Transcriptome and translatome profiling of Arabidopsis upf1-3 pad4 mutant
9.3 SRP018266 SRR653558 Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome
9.3 SRP266133 SRR11934418 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
The output is the 100 samples with the largest contribution to the coexpression.



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