Expression viewer

Gene annotation for AT3G62820

Platform:
Species ath
Symbol AT3G62820
Function* Plant invertase/pectin methylesterase inhibitor superfamily protein
Entrez Gene ID* 825457
Other ID At3g62820




Expression pattern of AT3G62820



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.6 ERP114064 ERR3185045 RNAseq analysis of Arabidopsis cell suspension culture treated with IAA, RN3 and RN4
12.5 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.6 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.5 SRP100064 SRR5262957 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5262962 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5262971 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263079 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263083 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263087 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263140 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263142 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263143 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263148 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.5 SRP100064 SRR5263185 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.4 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP267137 SRR12005767 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP267137 SRR12005769 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.6 SRP150181 SRR7287378 Comparative gene expression analysis in the Arabidopsis thaliana root apex using RNA-seq and microarray transcriptome profiles [RNA-seq]
10.4 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.2 SRP100064 SRR5262950 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5262952 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5262966 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5262969 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5263097 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5263139 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5263212 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5262982 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP164718 SRR7985417 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
10.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP090458 SRR4295841 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.1 SRP114806 SRR5894725 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP267137 SRR12005768 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.0 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP194106 SRR8983767 Arabidopsis thaliana 35S:ANT-GR Transcriptome
9.9 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.8 SRP285902 SRR12747468 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
9.8 SRP285902 SRR12747583 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
9.8 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
9.8 SRP139506 SRR6982867 Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots
9.8 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.8 SRP361760 SRR18163194 The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
9.8 SRP164718 SRR7985418 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
9.7 SRP327928 SRR15100977 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
9.7 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.7 SRP267137 SRR12005732 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
9.7 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP274404 SRR12356821 Exchange of molecular and cellular information: a hybrid model that integrates stem cell divisions and key regulatory interactions [w5C6]
9.7 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.6 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
9.6 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
9.6 SRP114806 SRR5894726 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.5 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.5 ERP015949 ERR1447074 Retrograde signalling during caused by heritable mitochondrial dysfunction is partly mediated by ANAC017 and improves plant performance.
9.5 SRP260311 SRR11714153 Next-generation sequencing of the oscillation zone of arf7 and iaa18/potent reveals new biological processes involved in the root clock function in Arabidopsis
9.5 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.4 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.4 SRP150181 SRR7287381 Comparative gene expression analysis in the Arabidopsis thaliana root apex using RNA-seq and microarray transcriptome profiles [RNA-seq]
9.4 SRP044123 SRR1508467 The CLE40 and CRN/CLV2 signaling pathways antagonistically control root meristem growth in Arabidopsis
9.4 SRP017386 SRR627674 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.4 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
9.4 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
9.4 SRP315390 SRR14275129 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
9.4 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP126574 SRR6369424 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.4 SRP126574 SRR6369462 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.4 SRP260311 SRR11714154 Next-generation sequencing of the oscillation zone of arf7 and iaa18/potent reveals new biological processes involved in the root clock function in Arabidopsis
9.4 ERP123539 ERR4471725 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.4 SRP277946 SRR12470169 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP267137 SRR12005741 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
9.4 SRP235374 SRR10614255 LFY is pioneer transcription factor [RNA-seq]
9.4 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.3 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.3 SRP101641 SRR5330635 Chloroplast signalling gates thermotolerance in Arabidopsis
9.3 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.3 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP139506 SRR6982844 Cell type identity determines transcriptomic immune responses in Arabidopsis thaliana roots
9.3 SRP098795 SRR5227415 RNA-seq data over Arabidopsis thaliana germination
9.3 SRP108634 SRR5646705 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
9.3 SRP105272 SRR5482543 Cell type transcriptomic profile of the Arabidopsis root stem cell niche
9.3 ERP116123 ERR3414784 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.3 SRP076459 SRR3659140 Dual role of LESION SIMULATING DISEASE 1 as a condition-dependent scaffold protein and transcription regulator in Arabidopsis
9.3 SRP188810 SRR8749820 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
9.2 SRP188270 SRR8717636 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
9.2 SRP114806 SRR5894373 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.2 SRP065450 SRR2850580 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
9.2 SRP098795 SRR5227416 RNA-seq data over Arabidopsis thaliana germination
9.2 SRP083970 SRR4115379 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
9.2 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP097877 SRR5205644 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP332285 SRR15427789 An Arabidopsis root phloem pole cell atlas reveals PINEAPPLE genes as transitioners to autotrophy [10x scRNA-seq]
9.1 SRP125388 SRR6312318 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
The output is the 100 samples with the largest contribution to the coexpression.



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