Expression viewer

Gene annotation for AT4G24780

Platform:
Species ath
Symbol AT4G24780
Function* Pectin lyase-like superfamily protein
Entrez Gene ID* 828580
Other ID At4g24780




Expression pattern of AT4G24780



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.8 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
14.5 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
14.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.7 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.6 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.6 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.6 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.4 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.3 SRP155742 SRR8699950 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.3 SRP155742 SRR8699953 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
13.2 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
13.0 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
13.0 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.9 SRP155742 SRR8699955 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.8 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
12.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.8 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
12.7 SRP277946 SRR12470186 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.6 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.6 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.6 SRP266133 SRR11934549 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.6 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.6 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.6 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
12.5 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.5 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
12.5 SRP051513 SRR1734301 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
12.4 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.4 SRP266133 SRR11934440 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.4 SRP114806 SRR5894737 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.4 ERP121227 ERR4038229 Influence of CAP-D3 in Arabidopsis thaliana transcription
12.4 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 SRP266133 SRR11934665 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.4 SRP277946 SRR12470183 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.4 SRP097877 SRR5205796 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.3 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
12.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.3 ERP121227 ERR4038230 Influence of CAP-D3 in Arabidopsis thaliana transcription
12.3 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP357889 SRR17847298 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
12.3 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
12.3 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
12.3 SRP073487 SRR3401827 Time course RNA-seq analysis of barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in defense phytohormone signaling-depleted Arabidopsis thaliana mutant.
12.3 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
12.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.2 SRP315390 SRR14275132 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
12.2 SRP277946 SRR12470202 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 SRP277946 SRR12470195 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.2 SRP017386 SRR627674 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.2 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
12.2 SRP267137 SRR12005728 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.2 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
12.1 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 SRP108542 SRR5640559 Gene expression profiling of the Arabidopsis glucosinolate deficient mutants, ref5-1 and ref2-1 and med5 mutants
12.1 SRP255966 SRR11523465 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
12.1 SRP266133 SRR11934591 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.1 SRP126574 SRR6369448 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.1 SRP257291 SRR11568014 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector
12.1 SRP234996 SRR10603563 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
12.1 SRP187477 SRR8667497 A role for PICKLE in the regulation of cold stress response in Arabidopsis
12.1 SRP067269 SRR2989703 Control, low water potential (drought) stress and stress release transcriptome analysis of mutants impaired in proline (Delta1-pyrroline-5-carboxylate synthase1-4; p5cs1-4) or abscisic acid (aba2-1) synthesis.
12.1 SRP060410 SRR2088041 Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
12.1 SRP051763 SRR1744360 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
12.1 SRP151348 SRR7429884 Transcriptome analysis of EDS1-R493A after Pst AvrRps4- triggered immunity
12.1 SRP097877 SRR5205803 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.0 SRP267137 SRR12005733 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.0 SRP246871 SRR11004646 half_edit - A new predictive method for E+ PPR binding
12.0 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
12.0 SRP371011 SRR18808274 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
12.0 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 SRP288674 SRR12903439 A. thaliana WT and ICT1 mutant treated vs. non treated with I3C
12.0 SRP188270 SRR8717650 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
12.0 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
12.0 SRP114806 SRR5894738 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.0 SRP051513 SRR1734307 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
11.9 SRP091641 SRR4449322 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.9 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP266133 SRR11934473 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.9 SRP201662 SRR9312936 Tissue specific light response during Arabidopsis de-etiolation
11.9 SRP266133 SRR11934706 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.9 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.9 SRP233656 SRR10555759 Arabidopsis QUANTIREX
11.9 SRP100064 SRR5263026 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.9 SRP238842 SRR10769016 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
11.9 SRP093765 SRR5045305 Transcriptome analysis after IAA paste application on pin1 mutant inflorescence meristems
11.9 SRP185336 SRR8554911 Next Generation Sequencing of Arabidopsis seedlings upon Mock or GR244DO Transcriptomes
11.9 SRP220476 SRR10072699 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
11.9 SRP090913 SRR8185474 WallOmics
11.9 SRP266133 SRR11934515 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.9 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
11.9 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
The output is the 100 samples with the largest contribution to the coexpression.



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