Expression viewer

Gene annotation for PFK3

Platform:
Species ath
Symbol PFK3
Function* phosphofructokinase 3
Entrez Gene ID* 828733
Other ID At4g26270




Expression pattern of PFK3



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.8 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.0 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.7 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP371011 SRR18808256 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.5 SRP102178 SRR5360800 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12469968 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP090457 SRR4295805 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.3 SRP277946 SRR12469641 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP277946 SRR12469770 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP277946 SRR12469969 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP277946 SRR12469639 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP063017 SRR2221840 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
10.1 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 SRP114806 SRR5894639 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.0 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.0 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP251062 SRR11206330 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
9.9 SRP114806 SRR5894651 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.8 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.8 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
9.8 SRP114806 SRR5894630 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.8 SRP102178 SRR5360774 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.7 SRP114806 SRR5894631 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.7 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
9.7 SRP220476 SRR10072752 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.7 SRP220476 SRR10072748 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.7 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
9.7 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
9.7 ERP015521 ERR1406281 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.7 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP114806 SRR5894640 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.7 SRP212098 SRR9602195 Gene expression profiling study by RNA-seq for identifying genes associated with sound vibration in plant
9.7 SRP220476 SRR10072750 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.6 SRP110167 SRR5742212 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
9.6 SRP148699 SRR7204078 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
9.6 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
9.6 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.6 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.5 SRP220476 SRR10072751 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.5 SRP237340 SRR10677199 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.5 SRP126290 SRR6356048 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
9.5 SRP102178 SRR5360790 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.5 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.5 SRP166137 SRR8078939 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
9.5 SRP114806 SRR5894649 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.5 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.5 SRP101641 SRR5330634 Chloroplast signalling gates thermotolerance in Arabidopsis
9.5 SRP361760 SRR18163194 The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
9.4 SRP118634 SRR6059769 Comparison between ethylene signaling regulated transcriptome with glucose-TOR or glucose-HXK1 regulated transcriptome
9.4 SRP237340 SRR10677198 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.4 SRP126290 SRR6356047 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
9.4 SRP114806 SRR5894650 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.4 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.4 SRP166137 SRR8078959 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
9.4 SRP090416 SRR4293717 Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered CO2 availability
9.4 SRP237340 SRR10677246 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.4 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
9.4 SRP034715 SRR1058305 Expression profiling during arabidopsis/downy mildew interaction reveals a highly-expressed effector that attenuates responses to salicylic acid.
9.3 SRP110167 SRR5742214 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
9.3 SRP285380 SRR12712260 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
9.3 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.3 SRP090457 SRR4295764 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
9.3 SRP090459 SRR4295976 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
9.3 SRP199288 SRR9113157 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.3 SRP199288 SRR9113159 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.3 SRP052276 SRR1760204 Arabidopsis thaliana Transcriptome or Gene expression
9.3 SRP051513 SRR1734306 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
9.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.3 SRP220476 SRR10072754 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.2 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP285380 SRR12712259 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
9.2 SRP102178 SRR5360868 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP051763 SRR1744362 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.2 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
9.2 SRP071947 SRR3234404 Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I]
9.2 SRP218723 SRR9995083 Plant 22-nt siRNAs mediate translational repression and stress adaptation
9.2 SRP097877 SRR5205726 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP214607 SRR9682394 Lipophilic-Signals Lead to Organ-Specific Gene Expression Changes in Arabidopsis Seedlings
9.2 SRP220476 SRR10072755 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.2 SRP237340 SRR10677223 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.2 SRP166137 SRR8078941 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
9.1 SRP091641 SRR4426418 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
9.1 SRP154321 SRR7535963 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
9.1 SRP154321 SRR7535962 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
9.1 SRP154321 SRR7536028 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
9.1 SRP108634 SRR5646725 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
9.1 SRP073511 SRR3403546 Study of expression changes during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors NLR activation II
9.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
The output is the 100 samples with the largest contribution to the coexpression.



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