Expression viewer

Gene annotation for AT4G30370

Platform:
Species ath
Symbol AT4G30370
Function* RING/U-box superfamily protein
Entrez Gene ID* 829160
Other ID At4g30370




Expression pattern of AT4G30370



Normalized expression
(Base-2 logarithm)
Experiment ID Sample ID Source Name in annotation
9.0 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.8 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.6 SRP357889 SRR17847298 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
8.6 SRP021196 SRR1610495 RNA-Seq of single cells from the Arabidopsis root
8.4 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
8.3 SRP151817 SRR7465414 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
8.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
8.1 SRP151817 SRR7465412 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
7.9 SRP101641 SRR5330611 Chloroplast signalling gates thermotolerance in Arabidopsis
7.8 SRP090459 SRR4295976 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
7.8 SRP151817 SRR7465450 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
7.8 SRP091641 SRR4426706 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
7.8 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
7.8 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
7.7 SRP136641 SRR6908911 Gene expression profiling (RNA-seq) in wild-type and bdrs triple mutant Arabidopsis seedlings in response to light or to a heat shock
7.7 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
7.7 ERP023227 ERR1990450 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
7.6 SRP111550 SRR5817852 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
7.6 SRP239091 SRR10804746 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
7.5 SRP187455 SRR8666074 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
7.5 SRP111550 SRR5817850 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
7.5 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
7.5 SRP306753 SRR13724859 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_22]
7.5 SRP313445 SRR14142025 A RALF-like peptide EaF82 derived from Epipremnum aureum inhibits pollen development in Arabidopsis and tobacco
7.5 SRP254418 SRR11442824 KA120 negatively regulates effector-triggered immunity [RNA-seq]
7.5 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
7.5 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
7.5 SRP090459 SRR4295972 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
7.5 SRP090458 SRR4295893 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
7.5 SRP149815 SRR7267224 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
7.5 SRP187455 SRR8666072 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
7.5 SRP169564 SRR8206385 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
7.4 SRP108634 SRR5646717 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
7.4 SRP162520 SRR7899137 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
7.4 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
7.4 SRP351935 SRR17295821 Influence of the downregulation of the MARS lncRNA (AT5G00580) of the response to Abscisic acid (ABA) in Arabidopsis
7.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
7.4 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
7.4 SRP075455 SRR3547922 The Proteasome Stress Regulon is Controlled by a Pair of NAC Transcription Factors in Arabidopsis
7.4 SRP126574 SRR6369445 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
7.3 SRP306748 SRR13724773 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_9_12]
7.3 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
7.3 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
7.3 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
7.3 SRP239091 SRR10804748 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
7.3 SRP246179 SRR10991444 Search for mitochondrial editing defect in an Arabidopsis PPR mutant
7.3 SRP324081 SRR14813623 ARATH-IN-OUT
7.3 SRP362867 SRR18254700 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
7.2 SRP119040 SRR6111280 RNA-seq analysis of emf1, lhp1, ebs shl and ebs shl lhp1 transcriptomes in Arabidopsis thaliana
7.2 SRP199175 SRR9107801 The Arabidopsis YDL1 suppresses singlet oxygen-induced gene expression changes
7.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
7.2 SRP234036 SRR10560274 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
7.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
7.2 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
7.2 SRP279325 SRR12546100 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
7.2 ERP115370 ERR3333405 Arabidopsis tissue atlas
7.2 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
7.2 SRP237340 SRR10677222 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
7.2 SRP103736 SRR5440887 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
7.2 SRP239091 SRR10804747 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
7.2 SRP136812 SRR6919666 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
7.2 SRP016026 SRR584128 Polypyrimidine tract-binding protein homologues from Arabidopsis are key regulators of alternative splicing with implications in fundamental developmental processes
7.2 SRP237791 SRR10704367 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
7.2 SRP158306 SRR7694867 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
7.2 SRP239091 SRR10804744 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
7.2 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
7.2 ERP023227 ERR1990451 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
7.2 SRP103736 SRR5440888 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
7.1 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
7.1 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
7.1 SRP090679 SRR4309602 Characterization of CAMTA mutant plants
7.1 SRP158306 SRR7694872 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
7.1 SRP266133 SRR11934557 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
7.1 SRP136536 SRR6902929 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and ahl10-1 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
7.1 SRP021196 SRR1610505 RNA-Seq of single cells from the Arabidopsis root
7.1 SRP324081 SRR14813616 ARATH-IN-OUT
7.1 SRP362867 SRR18254746 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
7.1 SRP090459 SRR4295974 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
7.1 SRP266133 SRR11934708 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
7.1 SRP148699 SRR7204078 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
7.1 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
7.1 ERP118500 ERR3668650 Transcription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
7.1 SRP151817 SRR7465448 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
7.1 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
7.1 SRP279501 SRR12558734 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
7.1 SRP187062 SRR8645816 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
7.1 SRP139789 SRR6989662 DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis [RNA-seq]
7.0 SRP136269 SRR6880727 Cold priming and triggering of Arabidopsis accessions
7.0 SRP136536 SRR6902927 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and ahl10-1 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
7.0 SRP279325 SRR12546096 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
7.0 SRP058628 SRR2037363 Transcriptome profiles and comparison of Arabidopsis thaliana woody (soc1-ful) and WT (Col-0) stems.
7.0 SRP254177 SRR11429260 Time course of brassinolide treatment on Arabidopsis seedlings
7.0 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
7.0 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
7.0 SRP188346 SRR8723335 rnadapt-Non-coding RNAs in the adaptation of root growth to phosphate starvation
7.0 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
7.0 SRP144429 SRR7100834 Hybrid vigour can be enhanced by delayed leaf senescence
7.0 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
7.0 SRP097877 SRR5205631 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
7.0 SRP331164 SRR15347022 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
The output is the 100 samples with the largest contribution to the coexpression.



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