Expression viewer

Gene annotation for AT5G12410

Platform:
Species ath
Symbol AT5G12410
Function* THUMP domain-containing protein
Entrez Gene ID* 831116
Other ID At5g12410




Expression pattern of AT5G12410



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.4 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.9 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
10.6 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.5 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.5 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.4 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.4 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP214325 SRR9672817 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
10.3 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.2 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
10.2 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 SRP166137 SRR8078926 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
10.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP041308 SRR1257406 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
10.2 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.1 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.1 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.1 SRP125388 SRR6312357 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.1 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP103736 SRR5440843 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.1 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.1 SRP255966 SRR11523452 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
10.0 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 SRP100064 SRR5262962 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.0 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.0 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP051513 SRR1734308 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
9.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
9.9 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.9 SRP100064 SRR5262960 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
9.9 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP244736 SRR10949344 Transcriptional regulation of cell division and cytokinin response in Arabidopsis shoot apical meristem [RNA-seq]
9.9 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.9 ERP110082 ERR2715070 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
9.9 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
9.9 SRP100064 SRR5262958 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
9.8 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP100064 SRR5262959 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
9.8 SRP125388 SRR6312347 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
9.8 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.8 SRP282437 SRR12642160 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.8 SRP154321 SRR7535975 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
9.8 SRP311462 SRR14022126 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
9.8 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
9.8 SRP052858 SRR1773555 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
9.8 SRP091014 SRR4381972 Col-0 leaves and root, control and iron-deficient
9.8 SRP189792 SRR8800760 Role of AtMLKLs in response to powdery mildew fungus
9.8 SRP220476 SRR10072780 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.8 SRP277946 SRR12469637 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP095390 SRR5121380 Induced one gene overexpression and check the transcriptional expression
9.8 SRP149815 SRR7266073 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
9.8 SRP090913 SRR8185474 WallOmics
9.8 SRP282437 SRR12642156 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.8 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.8 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.8 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP149815 SRR7267228 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
9.7 ERP116123 ERR3414783 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.7 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
9.7 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
9.7 SRP065807 SRR2927350 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
9.7 ERP116123 ERR3414784 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.7 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.7 SRP101965 SRR5346192 Salicylic acid-dependent and -independent transcriptome changes in response to methyl-erythritol cyclodiphosphate accumulation
9.7 SRP125388 SRR6312358 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
9.7 SRP301115 SRR13397341 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
9.7 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
9.7 SRP327928 SRR15100972 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
9.7 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.7 SRP081055 SRR4010828 Temperature induced alternative splicing is affected in sdg8 and sdg26.
9.7 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
9.7 SRP285902 SRR12747585 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
9.7 SRP031626 SRR1013891 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.7 SRP266133 SRR11934699 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.7 SRP154099 SRR7529175 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
9.7 SRP103736 SRR5440853 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.7 ERP118109 ERR3624341 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
The output is the 100 samples with the largest contribution to the coexpression.



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