Expression viewer

Gene annotation for DMR6

Platform:
Species ath
Symbol DMR6
Function* 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Entrez Gene ID* 832524
Other ID At5g24530




Expression pattern of DMR6



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.7 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.5 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
13.4 SRP164718 SRR7985424 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
13.2 SRP126156 SRR6347977 Equal parental contribution to the transcriptome is not equal control of embryogenesis
13.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.8 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.7 SRP097877 SRR5205726 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.5 SRP238086 SRR10733509 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
12.4 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
12.3 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP097877 SRR5205806 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.3 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
12.2 SRP277946 SRR12469737 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.2 SRP237791 SRR10704379 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
12.2 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 SRP251062 SRR11206332 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
12.1 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.0 SRP279149 SRR12539005 RNA-seq of Arabidopsis thaliana seedlings exposed to different communities of commensal bacteria [SSC]
12.0 SRP102178 SRR5360868 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP021196 SRR1610491 RNA-Seq of single cells from the Arabidopsis root
11.9 SRP237791 SRR10704377 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
11.8 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
11.8 SRP218253 SRR9962024 Cell lineage-specific transcriptome analysis for interpreting cell fate specification of proembryos
11.8 SRP237791 SRR10704378 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
11.8 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.7 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP052276 SRR1760198 Arabidopsis thaliana Transcriptome or Gene expression
11.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.7 SRP277946 SRR12469848 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP126290 SRR6356047 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
11.7 SRP126290 SRR6356048 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
11.7 ERP116123 ERR3414734 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.7 SRP282437 SRR12642235 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.6 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
11.6 ERP116123 ERR3414733 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
11.6 SRP161829 SRR7842015 Analysis of arabidopsis mutants tor/lst8/yak1/maktor
11.6 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
11.6 SRP266133 SRR11934439 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.6 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.6 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.5 ERP015521 ERR1406281 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
11.5 SRP102178 SRR5360850 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.5 SRP150771 SRR7357981 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
11.5 SRP267998 SRR12054329 RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis
11.5 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
11.5 SRP218723 SRR9995083 Plant 22-nt siRNAs mediate translational repression and stress adaptation
11.5 SRP076846 SRR3707336 The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status (mRNA-seq)
11.5 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
11.5 SRP287556 SRR12833433 Transcriptome in WT Col-0 and RLK7ECD-MIK2TK transgenic plants upon PIP1 treatment
11.5 SRP282437 SRR12642221 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
11.5 SRP199288 SRR9113128 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.4 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.4 SRP246179 SRR10991451 Search for mitochondrial editing defect in an Arabidopsis PPR mutant
11.4 SRP127000 SRR7750515 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
11.4 SRP136812 SRR6919677 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
11.4 SRP051513 SRR1734306 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
11.4 SRP074486 SRR3480202 The transcriptional outputs of AP2 and AG in floral development at the genomic scale
11.4 SRP325022 SRR14877265 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.4 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.4 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.4 SRP188810 SRR8749794 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
11.4 SRP214325 SRR9672850 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
11.4 SRP096695 SRR5172046 Elf18-induced long noncoding RNA associates with Mediator to enhance expression of innate immune response genes in Arabidopsis
11.4 SRP188810 SRR8749795 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
11.4 SRP114806 SRR5894627 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.4 SRP306748 SRR13724775 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_9_12]
11.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.4 SRP135665 SRR6833099 Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
11.4 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
11.4 SRP301115 SRR13397397 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
11.3 SRP155742 SRR7620862 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
11.3 ERP115136 ERR3310294 RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h)
11.3 SRP218723 SRR9995084 Plant 22-nt siRNAs mediate translational repression and stress adaptation
11.3 SRP058781 SRR2042821 Arabidopsis thaliana Transcriptome or Gene expression
11.3 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP097877 SRR5205741 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.3 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
11.3 SRP193460 SRR8944887 Selective egg cell polyspermy bypasses the triploid block
11.3 SRP151817 SRR7465414 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
11.3 SRP193460 SRR8944890 Selective egg cell polyspermy bypasses the triploid block
11.3 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.3 SRP222555 SRR10148640 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
11.3 SRP301115 SRR13397399 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
11.3 SRP193460 SRR8944888 Selective egg cell polyspermy bypasses the triploid block
11.3 SRP185814 SRR8570491 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
11.3 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
11.3 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
11.3 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.3 SRP065994 SRR2932431 Identification of plant vacuolar transporters mediating phosphate storage
11.3 SRP219673 SRR10037584 Characterization of Arabidopsis thaliana promoter bidirectionality and antisense RNAs by depletion of nuclear RNA decay pathways [RNA-seq]
11.3 SRP097877 SRR5205707 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.3 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
11.3 SRP097877 SRR5205704 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 SRP102178 SRR5360869 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.2 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP101641 SRR5330611 Chloroplast signalling gates thermotolerance in Arabidopsis
11.2 SRP285380 SRR12712249 Plant roots employ cell-layer specific programs to respond to pathogenic and beneficial microbes
11.2 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
The output is the 100 samples with the largest contribution to the coexpression.



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