Expression viewer

Gene annotation for AT5G38930

Platform:
Species ath
Symbol AT5G38930
Function* RmlC-like cupins superfamily protein
Entrez Gene ID* 833885
Other ID At5g38930




Expression pattern of AT5G38930



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.7 SRP237340 SRR10677216 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
14.1 SRP234036 SRR10560357 Gene expression profile of Arabidopsis thaliana wild type and siz1-2 mutant during in vitro shoot regeneration on callus inducing media (CIM) and shoot inducing media (SIM)
12.8 SRP267998 SRR12054338 RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis
12.5 SRP266133 SRR11934495 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.5 SRP266133 SRR11934650 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
12.2 SRP269194 SRR12108086 Mapping the transcriptional response to auxin in differentiated endodermal cells
11.7 SRP325022 SRR14877114 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.6 SRP253504 SRR11359541 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
11.6 SRP172180 SRR8275247 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
11.3 SRP074485 SRR3480194 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
11.2 SRP267137 SRR12005727 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.9 ERP118109 ERR3624488 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.9 ERP118109 ERR3624382 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.9 ERP118109 ERR3624395 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.9 ERP118109 ERR3624451 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
10.7 SRP074485 SRR3480195 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
10.5 SRP126574 SRR6369406 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 SRP126574 SRR6369423 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 SRP126574 SRR6369543 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.4 SRP172180 SRR8275250 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
10.3 SRP299921 SRR13338309 Transcriptome profiles of different light-signaling mutants
10.2 SRP093765 SRR5045306 Transcriptome analysis after IAA paste application on pin1 mutant inflorescence meristems
10.1 ERP012234 ERR1025341 Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
9.9 SRP070918 SRR3193353 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
9.8 SRP266133 SRR11934461 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934477 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934487 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934562 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934576 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934612 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934617 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934688 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934472 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.8 SRP266133 SRR11934601 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.7 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
9.7 SRP065807 SRR2927339 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
9.6 ERP023227 ERR1990473 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
9.3 SRP253436 SRR11356198 Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions
9.2 SRP306740 SRR13724690 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
9.1 SRP244736 SRR10949339 Transcriptional regulation of cell division and cytokinin response in Arabidopsis shoot apical meristem [RNA-seq]
9.0 SRP286390 SRR12773657 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
8.7 ERP116123 ERR3414833 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
8.7 SRP249648 SRR11093814 Gene dosge responses in nascent Arabidopsis thaliana polyploids
8.5 SRP172180 SRR8275252 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
8.5 SRP172180 SRR8275263 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
8.5 SRP172180 SRR8275264 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
8.5 ERP116123 ERR3414911 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
8.5 SRP048829 SRR1610325 Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
8.4 SRP307584 SRR13765854 RNA-seq of ?DS deletion vs +WT Complemented seeds
8.3 SRP093766 SRR5045315 Transcriptomic analysis of dorso-ventral cell-types of Arabidopsis shoot apical meristem
8.2 SRP126574 SRR6369369 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369523 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369526 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369410 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369414 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369417 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369418 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369429 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369441 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 SRP126574 SRR6369541 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.2 ERP116123 ERR3414834 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
8.1 SRP272397 SRR12248710 The corepressor of Topless-related 1 (TPR1): Transcript analysis of TPR1-GFP lines
8.1 SRP065450 SRR2850591 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
8.1 SRP065450 SRR2850596 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
8.1 SRP303743 SRR13575634 Arabidopsis thaliana Transcriptome for different potassium
8.0 SRP378006 SRR19505556 Transcriptional Reprogramming during Floral Fate Acquisition II
8.0 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
8.0 SRP173235 SRR8310108 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
7.9 SRP115534 SRR5937129 RNA-seq of genes mis-regulated in WT and the bpc1,2,3,4,6 loss-of-function mutant in response to cytokinin in roots of Arabidopsis thaliana
7.8 SRP098619 SRR5219223 Control of plant cell fate transitions by transcriptional and hormonal signals [RNA-seq: mock_vs_dex_3h]
7.8 ERP116123 ERR3414803 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.8 ERP116123 ERR3414829 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.8 ERP116123 ERR3414830 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.8 ERP116123 ERR3414912 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.8 SRP033661 SRR1046906 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
7.8 SRP033661 SRR1046924 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
7.8 SRP033661 SRR1046935 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
7.7 SRP285902 SRR12747402 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
7.7 SRP223758 SRR10205920 Integration of systemic signals in plants
7.6 ERP113389 ERR3079498 The effect of ?-butyrolactone (MB3) treatment on the transcript response after wounding of Arabidopsis thaliana roots
7.6 SRP185814 SRR8570506 RNA-seq analysis reveals organ-specific cold response in Arabidopsis thaliana
7.6 SRP108634 SRR5646723 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
7.5 SRP044123 SRR1508467 The CLE40 and CRN/CLV2 signaling pathways antagonistically control root meristem growth in Arabidopsis
7.4 SRP306303 SRR13706065 Antagonistic activities of co-transcriptional regulators within an early developmental window sets quantitative FLC expression
7.4 SRP306749 SRR13724782 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
7.3 ERP116123 ERR3414816 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.3 ERP116123 ERR3414826 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.3 ERP116123 ERR3414870 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
7.2 SRP056601 SRR1947750 Arabidopsis thaliana Transcriptome or Gene expression
7.2 SRP056601 SRR1947855 Arabidopsis thaliana Transcriptome or Gene expression
7.2 SRP057258 SRR1976478 BCAA catabolic mutants in prolonged darkness
7.2 SRP057258 SRR1976479 BCAA catabolic mutants in prolonged darkness
7.2 ERP115370 ERR3333435 Arabidopsis tissue atlas
7.2 SRP086708 SRR4175406 Transcriptomic analysis of defense responses in Arabidopsis thaliana wild-type and mammalian guanylate cyclase-expressing transgenic plants in response to infection with an avirulent strain of Pseudomonas syringae pv. tomato
7.1 SRP073003 SRR3347443 Gene expression analysis (RNA-seq) of Arabidopsis thaliana roots in wild type and trm4b-1 mutants under control and oxidative stress conditions
7.1 ERP115370 ERR3333434 Arabidopsis tissue atlas
7.0 SRP067344 SRR2993790 Transcriptome profiling of A. thaliana expressing auxin degradation resistant IAA26-P108H-GFP from the IAA26 native promoter
7.0 SRP351988 SRR17298932 MSH1 disruption in plants triggers RdDM-mediated reprogramming of phenotypic plasticity (RNA-Seq)
7.0 SRP221269 SRR10095891 Salicylic Acid Suppresses Apical Hook Formation via NPR1-Mediated Repression of EIN3/EIL1 in Arabidopsis
7.0 SRP155742 SRR7620849 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
The output is the 100 samples with the largest contribution to the coexpression.



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