Expression viewer

Gene annotation for AT5G38940

Platform:
Species ath
Symbol AT5G38940
Function* RmlC-like cupins superfamily protein
Entrez Gene ID* 833886
Other ID At5g38940




Expression pattern of AT5G38940



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
22.0 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
22.0 SRP220476 SRR10072698 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
18.9 SRP237340 SRR10677209 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
18.5 SRP154321 SRR7535942 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
18.5 SRP154321 SRR7535943 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
18.5 SRP154321 SRR7535944 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
18.5 SRP154321 SRR7535945 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
17.5 ERP015521 ERR1406274 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
15.5 SRP091641 SRR4426794 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.3 SRP091641 SRR4426674 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
14.0 SRP324081 SRR14813600 ARATH-IN-OUT
14.0 SRP362867 SRR18254734 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
14.0 SRP362867 SRR18254740 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
14.0 SRP324081 SRR14813597 ARATH-IN-OUT
14.0 SRP126290 SRR6356033 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
13.9 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
13.8 SRP091641 SRR4426675 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.8 SRP091641 SRR4426788 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.6 SRP093765 SRR5045300 Transcriptome analysis after IAA paste application on pin1 mutant inflorescence meristems
13.5 SRP239091 SRR10804744 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
13.2 SRP091641 SRR4426765 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.2 SRP091641 SRR4426967 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
13.1 SRP073485 SRR3401784 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
12.8 SRP360225 SRR18054333 RNAseq analysis of Arabidopsis thaliana apices of Col-0, ap2-12 and rAP2-VENUS plants at 1-cm bolting stage
12.8 SRP360225 SRR18054353 RNAseq analysis of Arabidopsis thaliana apices of Col-0, ap2-12 and rAP2-VENUS plants at 1-cm bolting stage
12.7 SRP253436 SRR11356181 Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions
12.5 SRP104760 SRR5467177 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
12.4 SRP162520 SRR7899136 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
12.4 SRP125057 SRR6294497 Genome-wide mapping of demethylase, REF6 binding targets and H3K27me3 marked regions as well as expression analysis in various Arabidopsis genetic backgrounds [RNA-seq]
12.3 SRP091641 SRR4426532 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.3 SRP091641 SRR4426533 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
12.3 SRP297673 SRR13242424 Transcriptome analysis of wild type and sweet1 seeds upon treatments during germination
12.0 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.9 SRP253507 SRR11359759 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
11.8 SRP108880 SRR6333616 Spatial control of gene expression by miR319-regulated TCP transcription factors in leaf development
11.5 SRP239091 SRR10804757 Genome-wide expression analysis of PTI and ETI responses in wild type and PRR-deficient Arabidopsis plants
11.4 SRP223758 SRR10205913 Integration of systemic signals in plants
11.2 SRP091641 SRR4426498 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426528 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426512 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426517 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426534 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426593 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426601 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426606 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426667 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426668 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426719 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426789 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426885 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426974 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP091641 SRR4426975 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.2 SRP266133 SRR11934495 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
11.2 SRP065450 SRR2850578 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
11.1 SRP249648 SRR11093814 Gene dosge responses in nascent Arabidopsis thaliana polyploids
11.1 SRP272397 SRR12248705 The corepressor of Topless-related 1 (TPR1): Transcript analysis of TPR1-GFP lines
11.1 SRP073485 SRR3401781 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.9 SRP151039 SRR7406470 transition-Transcriptome of floral transition
10.9 SRP070918 SRR3193342 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.9 SRP070918 SRR3193350 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.9 SRP070918 SRR3193358 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.9 SRP070918 SRR3193376 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
10.9 SRP095010 SRR5100674 Regulatory inversion in NAC networks steers the timing of age-dependent cell death in plants [RNA-Seq]
10.8 SRP288038 SRR12867892 Transcriptome analysis of alternative splicing under heat stress condition in atcyp18-1 mutant compared to wild type of Arabidopsis
10.8 SRP114806 SRR5894658 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.8 SRP109649 SRR5712404 Transcriptome profiling of mutants of CALMODULIN-LIKE (CML) family genes and CALMODULIN-BINDING PROTEIN 60 (CBP60) family genes in response to Pseudomonas syringae pv maculicola ES4326
10.7 SRP285868 SRR12746040 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
10.6 SRP266133 SRR11934612 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.5 SRP018034 SRR2079784 Time-course transcriptome of wild-type Arabidopsis leaf
10.5 SRP267998 SRR12054332 RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis
10.5 SRP074485 SRR3480194 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
10.5 SRP074485 SRR3480195 Spatiotemporal analysis of shade-induced transcriptional reprogramming in Arabidopsis reveals patterns underlying organ-specific growth
10.5 SRP114806 SRR5894646 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP065450 SRR2850576 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
10.4 SRP297585 SRR13239290 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.4 SRP073711 SRR3418013 RNA-seq of abscisic acid-reponsive transcription factors
10.3 ERP012234 ERR1025341 Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
10.3 SRP073511 SRR3403554 Study of expression changes during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors NLR activation II
10.2 SRP267870 SRR12046123 Single-cell RNA-seq data of Arabidopsis root
10.2 SRP267870 SRR12046124 Single-cell RNA-seq data of Arabidopsis root
10.2 SRP285868 SRR12746038 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
10.2 SRP266133 SRR11934487 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.2 SRP267998 SRR12054333 RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis
10.1 SRP267998 SRR12054334 RNAseq profiling of Col-0 and ex1ex2 mutant inoculated by fungus Alternaria alternata in Arabidopsis
10.1 SRP253507 SRR11359748 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
10.1 SRP097690 SRR5197934 Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
10.1 SRP097690 SRR5197938 Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
10.1 SRP073485 SRR3401782 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
10.0 SRP073486 SRR3401859 Study of expression changes during RPS4-mediated resistance in Arabidopsis using a temperature-inducible system which mirrors NLR activation
10.0 SRP031847 SRR1015541 Natural Variation and Timing of Stress Responses Promote and Predict Heterosis
10.0 ERP116123 ERR3414912 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.0 SRP219673 SRR10037584 Characterization of Arabidopsis thaliana promoter bidirectionality and antisense RNAs by depletion of nuclear RNA decay pathways [RNA-seq]
10.0 SRP173235 SRR8310109 Mediator12 and 13 act as conditional anti-silencing factors in Arabidopsis [RNA-seq]
10.0 SRP149815 SRR7265981 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
10.0 SRP050945 SRR1696858 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
9.9 SRP266133 SRR11934499 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.9 SRP269194 SRR12108086 Mapping the transcriptional response to auxin in differentiated endodermal cells
9.9 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.9 SRP014482 SRR525163 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.9 SRP014482 SRR525150 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
The output is the 100 samples with the largest contribution to the coexpression.



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