Expression viewer

Gene annotation for PME5

Platform:
Species ath
Symbol PME5
Function* Pectin lyase-like superfamily protein
Entrez Gene ID* 834800
Other ID At5g47500




Expression pattern of PME5



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.3 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
14.2 ERP118109 ERR3624481 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
14.0 SRP267137 SRR12005729 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
14.0 SRP267137 SRR12005754 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
13.8 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.8 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 ERP118109 ERR3624458 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
13.1 SRP307584 SRR13765849 RNA-seq of ?DS deletion vs +WT Complemented seeds
12.8 SRP021196 SRR1610498 RNA-Seq of single cells from the Arabidopsis root
12.5 SRP285868 SRR12746036 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
12.5 SRP285868 SRR12746037 Transcriptional responses of wild-type and zin1 mutant Arabidopsis plants to infection with Pseudomonas syringae
12.5 SRP017386 SRR627674 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.9 SRP151817 SRR7465411 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
11.8 SRP164718 SRR7985405 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
11.8 SRP306740 SRR13724696 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
11.7 SRP100064 SRR5263023 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.7 SRP306749 SRR14009247 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
11.6 SRP017386 SRR627673 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
11.5 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.5 ERP118109 ERR3624322 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624325 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624326 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624376 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624378 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624423 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624457 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624461 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624464 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624466 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624467 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624468 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624469 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.5 ERP118109 ERR3624470 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.4 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
11.4 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
11.4 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.2 SRP100064 SRR5263020 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.2 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.2 SRP100064 SRR5263021 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.2 SRP100064 SRR5263024 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
11.1 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP187381 SRR8661971 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
11.1 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.1 SRP090458 SRR4295942 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
11.1 SRP126156 SRR6347972 Equal parental contribution to the transcriptome is not equal control of embryogenesis
11.0 SRP126156 SRR6347971 Equal parental contribution to the transcriptome is not equal control of embryogenesis
11.0 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP249648 SRR11093814 Gene dosge responses in nascent Arabidopsis thaliana polyploids
11.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.9 SRP187381 SRR8661973 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.9 SRP187381 SRR8661960 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.9 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
10.9 SRP093697 SRR5038606 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or BTH
10.9 SRP214585 SRR9681202 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.9 SRP306751 SRR13724821 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_17-18]
10.8 SRP187381 SRR8661964 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.8 SRP100064 SRR5263025 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.8 SRP187381 SRR8661958 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.8 SRP098795 SRR5227417 RNA-seq data over Arabidopsis thaliana germination
10.8 SRP187381 SRR8661962 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.8 SRP222258 SRR15122050 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.8 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.7 SRP214585 SRR9681204 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.7 SRP214585 SRR9681191 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.7 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.7 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
10.7 SRP230790 SRR10502570 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
10.7 SRP277946 SRR12469863 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12469862 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP244461 SRR10959655 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
10.7 SRP100064 SRR5263027 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.7 SRP214585 SRR9681195 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.7 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.7 SRP090458 SRR4295846 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.6 SRP214585 SRR9681189 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.6 SRP214585 SRR9681193 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.6 SRP098795 SRR5227415 RNA-seq data over Arabidopsis thaliana germination
10.6 SRP098795 SRR5227416 RNA-seq data over Arabidopsis thaliana germination
10.6 SRP100064 SRR5263022 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.6 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.5 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.5 SRP114806 SRR5894381 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP187381 SRR8661950 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.5 SRP126156 SRR6347962 Equal parental contribution to the transcriptome is not equal control of embryogenesis
10.5 SRP323348 SRR14766007 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
10.5 SRP052858 SRR1773569 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
10.5 SRP198083 SRR9045745 Role of cis-zeatin in root responses to phosphate starvation
10.5 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
10.5 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
10.5 SRP052858 SRR1773556 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
10.5 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
10.5 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP187381 SRR8661948 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.5 SRP164718 SRR7985404 Maternal to zygotic transition:A two-step process with two phases of ZGA occurs in zygote right after fertilization in Arabidopsis
10.5 SRP220476 SRR10072700 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.5 SRP220476 SRR10072708 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.5 SRP173766 SRR8335147 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
The output is the 100 samples with the largest contribution to the coexpression.



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