Expression viewer

Gene annotation for KAT5

Platform:
Species ath
Symbol KAT5
Function* peroxisomal 3-keto-acyl-CoA thiolase 2
Entrez Gene ID* 834946
Other ID At5g48880




Expression pattern of KAT5



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.7 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.5 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
11.2 SRP021196 SRR1610507 RNA-Seq of single cells from the Arabidopsis root
11.2 SRP126574 SRR6369500 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
11.2 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.2 SRP149670 SRR7252675 Effect of GA on PAC and PAO1 treated Arabidopsis seeds
11.2 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
11.2 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.1 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.0 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.0 SRP277946 SRR12469969 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.9 SRP091641 SRR4426608 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.8 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.8 SRP091641 SRR4426597 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.7 SRP021196 SRR1610480 RNA-Seq of single cells from the Arabidopsis root
10.7 SRP365415 SRR18441283 Transcriptome profiling of Arabidopsis roots upon lateral root induction in WT and TOR knock down [dataset1]
10.7 SRP214585 SRR9681365 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.7 SRP114806 SRR5894622 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 SRP199288 SRR9113135 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
10.6 SRP214585 SRR9681367 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.6 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.6 SRP176451 SRR8404540 Co-targeting RNA Polymerases IV and V promotes efficient de novo DNA methylation in Arabidopsis [RNA-seq]
10.6 SRP214585 SRR9681366 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.6 SRP282437 SRR12642100 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.5 SRP126574 SRR6369396 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.5 SRP214585 SRR9681368 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.5 SRP090458 SRR4295839 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.5 SRP214585 SRR9681362 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.5 SRP277946 SRR12469944 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12470131 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP090458 SRR4295873 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.5 SRP187381 SRR8662266 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.4 SRP052029 SRR1752193 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
10.4 SRP049993 SRR1655117 Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
10.4 SRP254970 SRR11468703 Multifactorial stress combination
10.4 SRP158306 SRR7694986 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.4 SRP091641 SRR4426577 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.4 SRP100933 SRR5304253 Gene expression profiling of the Arabidopsis Mediator MED5 mutant ref4-3 and suppressors thereof
10.4 SRP189792 SRR8800756 Role of AtMLKLs in response to powdery mildew fungus
10.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.4 SRP158306 SRR7694888 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.4 SRP158306 SRR7694974 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.4 SRP114806 SRR5894730 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 SRP059744 SRR2072729 Identification of mRNAs Regulated in Response to Transcriptional Activation of the Arabidopsis ABA INSENSITIVE GROWTH 1 (ABIG1) Transcription Factor cDNA
10.3 SRP238842 SRR10769010 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
10.3 SRP158306 SRR7694985 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.3 SRP277946 SRR12469968 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
10.3 SRP098795 SRR5227415 RNA-seq data over Arabidopsis thaliana germination
10.3 SRP154099 SRR7529165 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
10.3 SRP187381 SRR8662264 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
10.3 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.3 SRP277946 SRR12469730 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP214585 SRR9681364 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
10.3 SRP254970 SRR11468701 Multifactorial stress combination
10.3 SRP254970 SRR11468705 Multifactorial stress combination
10.3 SRP214325 SRR9672817 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
10.2 ERP115136 ERR3310295 RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h)
10.2 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP279325 SRR12546062 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
10.2 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP158306 SRR7694876 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.2 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
10.2 SRP158306 SRR7694973 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.2 SRP163044 SRR7947113 Global identification of Arabidopsis lncRNAs reveals the regulation of MAF4 by a natural antisense RNA
10.2 SRP135665 SRR6833105 Arabidopsis SE coordinates histone methyltransferases ATXR5/6 and RNA processing factor RDR6 to regulate transposon expression [RNA-Seq]
10.2 SRP277946 SRR12469750 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP098795 SRR5227417 RNA-seq data over Arabidopsis thaliana germination
10.2 SRP132408 SRR6684450 Direct control of SPEECHLESS by PIF4 in the high temperature response of stomatal development
10.2 SRP169576 SRR8206664 High-throughput single-cell transcriptome profiling of plant cell types
10.2 SRP098795 SRR5227416 RNA-seq data over Arabidopsis thaliana germination
10.2 SRP119072 SRR6113997 Nucleo-cytoplasmic partitioning of ARF proteins controls auxin responses in Arabidopsis thaliana
10.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.2 SRP081056 SRR4010839 Temperature induced changes in the Arabidopsis transcriptome
10.2 SRP277946 SRR12469921 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP081056 SRR4010840 Temperature induced changes in the Arabidopsis transcriptome
10.1 SRP371011 SRR18808265 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
10.1 SRP369624 SRR18718395 Strigolactone action in mitochondria triggers retrograde signaling for root growth modulation
10.1 SRP112501 SRR5831027 Combining chemical and genetic approaches to increase drought resistance in plants
10.1 SRP051763 SRR1744360 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.1 SRP103736 SRR5440784 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 SRP158306 SRR7694987 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
10.1 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
10.1 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
10.1 SRP266133 SRR11934434 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
10.1 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
10.1 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.1 SRP126574 SRR6369352 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.1 SRP282437 SRR12642102 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
10.0 SRP169564 SRR8206378 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.0 SRP158306 SRR7694992 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
The output is the 100 samples with the largest contribution to the coexpression.



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