Expression viewer

Gene annotation for SPL13B

Platform:
Species ath
Symbol SPL13B
Function* Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
Entrez Gene ID* 835138
Other ID At5g50670




Expression pattern of SPL13B



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.0 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.8 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.2 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
9.9 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
9.8 SRP282437 SRR12642275 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.6 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
9.5 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.5 SRP097690 SRR5197924 Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
9.5 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
9.4 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
9.4 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.4 SRP187455 SRR8666074 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
9.4 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.4 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.4 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.3 SRP237340 SRR10677234 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.3 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.3 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
9.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
9.3 SRP237340 SRR10677210 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.3 SRP136812 SRR6919666 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
9.3 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.3 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
9.2 SRP126156 SRR6347982 Equal parental contribution to the transcriptome is not equal control of embryogenesis
9.2 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
9.2 SRP253507 SRR11359746 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
9.2 SRP091641 SRR4426761 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
9.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.2 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
9.1 SRP117360 SRR6030908 The Arabidopsis transcription factor TCP5 during petal and inflorescence development
9.1 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.1 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.0 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
9.0 SRP041308 SRR1257405 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
9.0 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
9.0 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 ERP118500 ERR3668659 Transcription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
9.0 SRP282437 SRR12642284 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
9.0 SRP238086 SRR10733519 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
9.0 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP189792 SRR8800693 Role of AtMLKLs in response to powdery mildew fungus
9.0 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.0 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP362867 SRR18254721 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
8.9 SRP282437 SRR12642258 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
8.9 SRP073485 SRR3401780 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
8.9 SRP324081 SRR14813586 ARATH-IN-OUT
8.9 SRP306740 SRR13724694 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
8.9 SRP241907 SRR10883951 Molecular mechanisms of Enterobacter sp. SA187 induced thermotolerance in Arabidopsis thaliana
8.9 SRP233656 SRR10555766 Arabidopsis QUANTIREX
8.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP073485 SRR3401779 Time course RNA-seq analysis of expression changes upon MLACC expression in Arabidopsis using a dexamethasone-inducible system which mirrors NLR activation
8.9 SRP253436 SRR11356191 Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions
8.8 SRP090913 SRR4360373 WallOmics
8.8 SRP136536 SRR6902935 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and ahl10-1 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
8.8 SRP111550 SRR5817858 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
8.8 SRP047144 SRR1584415 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
8.8 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.8 SRP047297 SRR1578877 Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
8.8 SRP073379 SRR3393590 Arabidopsis BIC1 inactivates CRY2 by suppressing the blue light-dependent cryptochrome dimerization
8.8 SRP091641 SRR4426512 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.8 SRP301115 SRR13397397 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
8.8 ERP015521 ERR1406264 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
8.7 SRP044776 SRR1523913 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
8.7 SRP233656 SRR10555768 Arabidopsis QUANTIREX
8.7 SRP102178 SRR5360869 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.7 SRP362867 SRR18254736 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
8.7 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.7 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.7 SRP214585 SRR9681289 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
8.7 SRP111550 SRR5817852 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
8.7 SRP269252 SRR12110256 Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length
8.7 SRP093697 SRR5038590 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or BTH
8.7 SRP044746 SRR3046814 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
8.7 SRP222555 SRR10148650 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
8.7 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
8.7 SRP111550 SRR5817857 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
8.7 SRP091641 SRR4426479 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.7 SRP324081 SRR14813614 ARATH-IN-OUT
8.7 SRP039091 SRR1179961 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
8.7 SRP219510 SRR10030453 RNA-seq analysis of D-tagatose-treated Arabidopsis thaliana inoculated with Hyaloperonospora arabidopsidis isolate Noco-2
8.7 SRP090458 SRR4295886 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.7 SRP315390 SRR14275166 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
8.7 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.7 SRP370448 SRR18767860 Arabidopsis thaliana Transcriptome or Gene expression
8.7 SRP199288 SRR9113120 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
8.7 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
8.6 SRP016025 SRR584126 Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the eukaryotic steady state transcriptome
8.6 SRP114806 SRR5894611 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.6 SRP277946 SRR12469825 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP048829 SRR1610302 Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
The output is the 100 samples with the largest contribution to the coexpression.



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