Expression viewer
Gene annotation for AT5G53920
Expression pattern of AT5G53920
| Normalized expression (Base-2 logarithm) |
Experiment ID | Sample ID | Source Name in annotation |
|---|---|---|---|
| 8.1 | SRP114806 | SRR5894661 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 8.0 | SRP281951 | SRR12620965 | RNA-Seq experiment on Arabidopsis seedlings regarding SLIM1 and EIL1 function at low S |
| 7.9 | SRP310860 | SRR13977116 | Spider mite egg extract modifies Arabidopsis response to future infestations |
| 7.9 | SRP351684 | SRR17281133 | Transcriptomic profile of FERONIA mutant treated with Aradopside |
| 7.7 | SRP277946 | SRR12470184 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 7.7 | SRP021196 | SRR1610479 | RNA-Seq of single cells from the Arabidopsis root |
| 7.7 | ERP015521 | ERR1406301 | Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000 |
| 7.7 | SRP365283 | SRR18430906 | Time-series RNAseq analysis following lateral root induction by gravistimulation |
| 7.7 | SRP189792 | SRR8800692 | Role of AtMLKLs in response to powdery mildew fungus |
| 7.7 | SRP037984 | SRR1170682 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 7.7 | SRP044776 | SRR1523903 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 7.6 | SRP187381 | SRR8662247 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.6 | SRP285090 | SRR12697055 | Differential alteration of plant functions by homologous fungal candidate effectors |
| 7.6 | SRP261821 | SRR11795799 | Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid |
| 7.6 | SRP044776 | SRR1523904 | High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade |
| 7.6 | SRP187381 | SRR8662243 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.5 | SRP187381 | SRR8662245 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.5 | SRP014482 | SRR525107 | Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana |
| 7.5 | SRP095347 | SRR5120250 | Genetic influences on gene expression in Arabidopsis thaliana |
| 7.4 | SRP051513 | SRR1734301 | Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids |
| 7.4 | SRP187062 | SRR8645808 | Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis |
| 7.4 | SRP191093 | SRR8859587 | RNA-seq of the roots of Arabidopsis thaliana plants growing in soil treated under different fertilization regimes. |
| 7.4 | SRP108336 | SRR5631429 | Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type |
| 7.4 | SRP194106 | SRR8983767 | Arabidopsis thaliana 35S:ANT-GR Transcriptome |
| 7.4 | SRP187381 | SRR8662231 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.4 | SRP187381 | SRR8662234 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.4 | SRP101641 | SRR5330566 | Chloroplast signalling gates thermotolerance in Arabidopsis |
| 7.4 | SRP095347 | SRR5120424 | Genetic influences on gene expression in Arabidopsis thaliana |
| 7.3 | SRP282437 | SRR12642171 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 7.3 | SRP187381 | SRR8662248 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.3 | SRP282437 | SRR12642169 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 7.3 | SRP031847 | SRR1015545 | Natural Variation and Timing of Stress Responses Promote and Predict Heterosis |
| 7.3 | SRP244736 | SRR10949344 | Transcriptional regulation of cell division and cytokinin response in Arabidopsis shoot apical meristem [RNA-seq] |
| 7.3 | SRP282437 | SRR12642170 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 7.3 | SRP108634 | SRR5646717 | Locus-specific control of the de novo DNA methylation pathway [mRNA-seq] |
| 7.3 | ERP116123 | ERR3414784 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.3 | SRP280005 | SRR12583402 | The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana |
| 7.3 | ERP116123 | ERR3414783 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.3 | SRP271641 | SRR12211735 | Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold |
| 7.3 | SRP267337 | SRR12014981 | Transcriptome analysis of Arabidopsis thaliana shoots and roots, exposed to PEG-induced osmotic shock, PEG+Histidine, PEG+SHAM [20191204_130529_uLox_PEG_Shock] |
| 7.3 | SRP173766 | SRR8335133 | Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana |
| 7.2 | ERP116123 | ERR3414772 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.2 | SRP154322 | SRR7536160 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2] |
| 7.2 | SRP114806 | SRR5894427 | RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions |
| 7.2 | SRP018266 | SRR653556 | Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome |
| 7.2 | SRP327928 | SRR15100972 | Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function |
| 7.2 | SRP214585 | SRR9681338 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 7.2 | ERP116123 | ERR3414782 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.2 | ERP116123 | ERR3414788 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.2 | SRP060410 | SRR2088041 | Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations |
| 7.2 | SRP029957 | SRR988015 | Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression |
| 7.2 | SRP222258 | SRR15122126 | A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism |
| 7.2 | SRP279149 | SRR12538998 | RNA-seq of Arabidopsis thaliana seedlings exposed to different communities of commensal bacteria [SSC] |
| 7.2 | SRP187381 | SRR8662240 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.2 | SRP100080 | SRR5264218 | Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase |
| 7.2 | SRP100080 | SRR5264219 | Ascorbate concentration in Arabidopsis is controlled at the gene expression level mainly by GDP galactose phosphorylase |
| 7.2 | SRP158306 | SRR7694924 | Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq] |
| 7.2 | SRP097877 | SRR5205619 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 7.2 | SRP095347 | SRR5120428 | Genetic influences on gene expression in Arabidopsis thaliana |
| 7.1 | ERP116123 | ERR3414771 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.1 | ERP116123 | ERR3414787 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.1 | SRP051393 | SRR1726976 | RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants |
| 7.1 | SRP253504 | SRR11359543 | Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves |
| 7.1 | SRP093697 | SRR5038606 | RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or BTH |
| 7.1 | SRP201971 | SRR9331160 | RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types |
| 7.1 | SRP026541 | SRR926197 | Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression |
| 7.1 | SRP041308 | SRR1257406 | Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis |
| 7.1 | SRP187381 | SRR8662237 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.1 | SRP052302 | SRR1761508 | mRNA-seq of ros1-3 and ros1-4 with ABA treatment |
| 7.1 | SRP252640 | SRR11300791 | XPO4 negatively regulates immune activation in the cpr5 mutant |
| 7.1 | SRP269252 | SRR12110258 | Maternally expressed imprinted gene SDC modulates circadian period and hypocotyl length |
| 7.1 | SRP188810 | SRR8749817 | RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr |
| 7.1 | SRP103736 | SRR5440841 | Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply |
| 7.1 | SRP267337 | SRR12014984 | Transcriptome analysis of Arabidopsis thaliana shoots and roots, exposed to PEG-induced osmotic shock, PEG+Histidine, PEG+SHAM [20191204_130529_uLox_PEG_Shock] |
| 7.1 | SRP095347 | SRR5120422 | Genetic influences on gene expression in Arabidopsis thaliana |
| 7.1 | SRP277946 | SRR12469632 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 7.1 | SRP199288 | SRR9113158 | In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size |
| 7.1 | SRP214585 | SRR9681562 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 7.0 | SRP110833 | SRR5796523 | Arabidopsis thaliana WT and mutant cngc16 pollen grain heat stress transcriptome |
| 7.0 | SRP126574 | SRR6369494 | Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis |
| 7.0 | SRP282437 | SRR12642166 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 7.0 | ERP116123 | ERR3414781 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.0 | SRP149815 | SRR7266073 | Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity |
| 7.0 | SRP187381 | SRR8662235 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.0 | SRP187381 | SRR8662242 | Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L. |
| 7.0 | SRP097877 | SRR5205630 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 7.0 | SRP097877 | SRR5205646 | An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana |
| 7.0 | ERP116123 | ERR3414779 | Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress |
| 7.0 | SRP166137 | SRR8078956 | RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana) |
| 7.0 | SRP214585 | SRR9681331 | Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins |
| 7.0 | SRP277946 | SRR12470191 | RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE] |
| 7.0 | SRP267332 | SRR12014902 | Transcriptome analysis of Arabidopsis thaliana shoots and roots, exposed to PEG-induced osmotic shock, PEG+Histidine, PEG+SHAM [20190613_174740_sham_cont] |
| 7.0 | SRP351690 | SRR17281225 | Somatic DNA demethylation generates tissue-specific methylation states and impacts flowering time [RNA-seq] |
| 7.0 | SRP201971 | SRR9331196 | RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types |
| 7.0 | SRP074486 | SRR3480203 | The transcriptional outputs of AP2 and AG in floral development at the genomic scale |
| 7.0 | SRP154322 | SRR7536158 | Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2] |
| 7.0 | SRP282437 | SRR12642161 | Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids |
| 7.0 | SRP234996 | SRR10603595 | Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity |
| 7.0 | SRP189792 | SRR8800695 | Role of AtMLKLs in response to powdery mildew fungus |
| 7.0 | SRP065807 | SRR2927350 | Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos |
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