Expression viewer

Gene annotation for AT5G59460

Platform:
Species ath
Symbol AT5G59460
Function* scarecrow-like transcription factor 11 (SCL11)
Entrez Gene ID* 836065
Other ID At5g59460




Expression pattern of AT5G59460



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
9.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.2 SRP114806 SRR5894385 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.1 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
8.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
8.9 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
8.9 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
8.8 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
8.7 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.7 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.7 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
8.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.6 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
8.6 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP244461 SRR10959655 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
8.6 SRP017386 SRR627631 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
8.5 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.5 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
8.5 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.5 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
8.5 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.5 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.5 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
8.5 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.4 SRP114806 SRR5894445 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.4 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP266133 SRR11934487 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
8.4 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
8.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
8.4 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.4 SRP114806 SRR5894687 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.4 SRP154323 SRR7536249 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
8.4 SRP103736 SRR5440843 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.3 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
8.3 SRP201971 SRR9331196 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
8.3 SRP090913 SRR8185487 WallOmics
8.3 SRP334993 SRR15679185 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes
8.3 SRP149815 SRR7267228 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
8.3 SRP150771 SRR7357988 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
8.3 SRP133704 SRR6793628 Singlet oxygen induced RNA oxidation and translational arrest [RB]
8.3 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.3 SRP277946 SRR12470064 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
8.2 SRP255966 SRR11523465 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
8.2 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
8.2 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
8.2 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP049993 SRR1655117 Genome-wide analysis of wild type and gemin2 mutant plants [cold exposure]
8.2 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
8.2 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
8.2 SRP286390 SRR12773653 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
8.2 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
8.2 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
8.2 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
8.1 SRP282437 SRR12642158 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
8.1 SRP090457 SRR4295746 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
8.1 SRP133385 SRR6767648 Time-course transcriptomic analysis of Arabidopsis response to high light stress
8.1 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
8.1 SRP065807 SRR2927331 Transcriptomics analysis of developing wild type and val1 mutant Arabidopsis embryos
8.1 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP072300 SRR3290787 Arabidopsis SAURs Are Critical for Differential Light Regulation of the Development of Various Organs
8.1 ERP118109 ERR3624351 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
8.1 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.1 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
8.1 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.1 SRP372716 SRR18963419 Interpreting gene co-regulation and metabolic profiling in the unique starch metabolism of Arabidopsis dpe2/phs1 mutant reveals insights into control mechanism of the starch granule number
8.1 SRP154323 SRR7536246 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
8.1 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP111550 SRR5817854 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
8.1 SRP101965 SRR5346192 Salicylic acid-dependent and -independent transcriptome changes in response to methyl-erythritol cyclodiphosphate accumulation
8.1 SRP122518 SRR6230490 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
8.1 SRP277943 SRR12469284 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.1 SRP370448 SRR18767860 Arabidopsis thaliana Transcriptome or Gene expression
8.1 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
8.0 SRP277946 SRR12470081 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP311690 SRR14037557 Transcriptomic changes upon ABA treatment dependent on VND transcription factors
8.0 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
8.0 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.0 SRP244078 SRR10953372 Conserved Arabidopsis response to oviposition and crude egg extract treatment
8.0 SRP187582 SRR8670137 Flg22 induces CERK1 phosphorylation
8.0 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.0 SRP323348 SRR14766035 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
8.0 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
8.0 SRP129034 SRR6470087 mRNA sequencing of msh1 memory line in Arabidopsis
8.0 SRP100064 SRR5262956 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
8.0 SRP301115 SRR13397335 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
8.0 SRP282437 SRR12642157 Complementary capability of cell division and photosynthesis triggers growth vigor in Arabidopsis hybrids
8.0 SRP277946 SRR12469848 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP031626 SRR1013891 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.0 SRP101641 SRR5330571 Chloroplast signalling gates thermotolerance in Arabidopsis
8.0 SRP114806 SRR5894391 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.0 SRP114806 SRR5894438 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.0 SRP114806 SRR5894451 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.0 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
The output is the 100 samples with the largest contribution to the coexpression.



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