Expression viewer

Gene annotation for PPCK1

Platform:
Species ath
Symbol PPCK1
Function* phosphoenolpyruvate carboxylase kinase 1
Entrez Gene ID* 837387
Other ID At1g08650




Expression pattern of PPCK1



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.9 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP090459 SRR4295976 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
11.4 SRP199288 SRR9113131 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
11.3 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP357889 SRR17847298 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
11.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
11.2 SRP277946 SRR12469767 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.2 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 SRP090913 SRR8185442 WallOmics
11.1 SRP237340 SRR10677224 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
11.1 SRP151817 SRR7465450 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
11.1 SRP279325 SRR12546054 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
11.0 SRP277946 SRR12469769 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP151817 SRR7465414 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
11.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
10.9 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP114806 SRR5894525 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.9 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.9 SRP148699 SRR7204064 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
10.9 SRP126574 SRR6369445 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.9 SRP110167 SRR5742210 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
10.9 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
10.8 SRP090457 SRR4295762 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
10.8 SRP090458 SRR4295913 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.8 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.8 SRP237340 SRR10677222 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
10.8 SRP114806 SRR5894427 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.7 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
10.7 SRP090459 SRR4295970 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.7 ERP023227 ERR1990450 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
10.7 SRP090458 SRR4295914 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.7 SRP126574 SRR6369439 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.7 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.7 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
10.7 SRP126574 SRR6369444 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.7 SRP277946 SRR12469770 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 ERP115136 ERR3310294 RNA-seq of circadian timeseries sampling (LL2-3) of 13-14 day old Arabidopsis thaliana Col-0 (24 h to 68 h, sampled every 4 h)
10.6 SRP114806 SRR5894646 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.6 SRP277946 SRR12469768 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.6 SRP220476 SRR10072753 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.5 SRP114806 SRR5894526 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP114806 SRR5894628 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP097877 SRR5205806 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.5 SRP351935 SRR17295821 Influence of the downregulation of the MARS lncRNA (AT5G00580) of the response to Abscisic acid (ABA) in Arabidopsis
10.5 SRP306751 SRR13724822 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_17-18]
10.5 SRP090459 SRR4295972 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.5 SRP091641 SRR4426512 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.5 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
10.5 SRP114806 SRR5894627 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP090459 SRR4295974 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI]
10.5 SRP189895 SRR8816080 Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS
10.5 ERP110082 ERR2715067 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
10.5 SRP114806 SRR5894552 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 SRP188270 SRR8717638 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
10.5 SRP219435 SRR10027528 The LRX-RALF-FER cell wall integrity sensing module controls plant growth and salt stress responses by modulating multiple plant hormones
10.4 SRP114806 SRR5894394 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.4 SRP090458 SRR4295910 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.4 SRP218723 SRR9995099 Plant 22-nt siRNAs mediate translational repression and stress adaptation
10.4 ERP023227 ERR1990451 Establishment of photosynthesis through chloroplast development is controlled by two distinct regulatory phases
10.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.4 SRP230790 SRR10502574 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
10.4 SRP114806 SRR5894551 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 SRP101274 SRR5308700 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
10.4 SRP323348 SRR14766004 Differentially expressed transcriptomes of NADases mutant in Arabidopsis
10.4 SRP301115 SRR13397402 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
10.4 SRP218723 SRR9995098 Plant 22-nt siRNAs mediate translational repression and stress adaptation
10.4 SRP114806 SRR5894393 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.4 SRP237340 SRR10677223 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
10.4 SRP220476 SRR10072750 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.4 SRP220476 SRR10072755 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.4 SRP233656 SRR10555767 Arabidopsis QUANTIREX
10.4 SRP144429 SRR7100829 Hybrid vigour can be enhanced by delayed leaf senescence
10.4 SRP154321 SRR7535946 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.4 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.4 SRP090458 SRR4295893 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.3 SRP090913 SRR8185443 WallOmics
10.3 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.3 SRP114806 SRR5894629 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 SRP154321 SRR7535949 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.3 SRP222555 SRR10148625 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
10.3 SRP173766 SRR8335145 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
10.3 SRP229635 SRR10435445 An intact heterotrimeric G-Protein complex is required for the N-acylethanolamine-induced, transcriptionally-mediated chloroplast response in developing Arabidopsis seedlings
10.3 SRP253436 SRR11356191 Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions
10.3 SRP110167 SRR5742211 mRNA-seq of Arabidopsis mutants of UPR modulators responding to UPR inducers
10.3 SRP285119 SRR12698845 Time of day prioritizes the pool of translating mRNAs in response to heat stress
10.3 SRP148699 SRR7204063 An essential role for Abscisic acid in the regulation of xylem fibre differentiation
10.3 SRP254177 SRR11429278 Time course of brassinolide treatment on Arabidopsis seedlings
10.3 SRP097690 SRR5197931 Tissue-Specific Transcriptomics Reveals Role of the Unfolded Protein Response in Maintaining Fertility upon Heat Stress in Arabidopsis
10.3 SRP122518 SRR6230509 Potential role of the CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
10.3 SRP306303 SRR13706063 Antagonistic activities of co-transcriptional regulators within an early developmental window sets quantitative FLC expression
10.3 SRP154321 SRR7535948 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [Timecourse]
10.3 SRP187477 SRR8667492 A role for PICKLE in the regulation of cold stress response in Arabidopsis
The output is the 100 samples with the largest contribution to the coexpression.



The preparation time of this page was 0.2 [sec].