Expression viewer

Gene annotation for AT1G17990

Platform:
Species ath
Symbol AT1G17990
Function* FMN-linked oxidoreductases superfamily protein
Entrez Gene ID* 838379
Other ID At1g17990




Expression pattern of AT1G17990



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.7 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
11.5 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 SRP230790 SRR10502556 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
11.3 SRP277946 SRR12470075 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.3 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.2 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
11.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.1 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.0 SRP136812 SRR6919666 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.9 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
10.9 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.9 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.9 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.8 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.7 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.7 SRP220476 SRR10072748 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.7 SRP199288 SRR9113095 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
10.7 SRP127000 SRR6388213 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
10.6 SRP199288 SRR9113096 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
10.6 SRP129034 SRR6470082 mRNA sequencing of msh1 memory line in Arabidopsis
10.6 SRP267137 SRR12005743 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
10.6 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.6 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP114806 SRR5894698 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.5 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.5 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP286390 SRR12773637 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
10.4 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
10.4 SRP301115 SRR13397334 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
10.4 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.4 SRP260311 SRR11714159 Next-generation sequencing of the oscillation zone of arf7 and iaa18/potent reveals new biological processes involved in the root clock function in Arabidopsis
10.4 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.4 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.4 SRP301115 SRR13397335 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
10.3 SRP260311 SRR11714160 Next-generation sequencing of the oscillation zone of arf7 and iaa18/potent reveals new biological processes involved in the root clock function in Arabidopsis
10.3 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.3 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.2 SRP187455 SRR8666074 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0) and a stable transgenic line with ectopic expression of AT3G11290 (35S:HIN1) under control conditions and after 96 hours at moderate low water potential stress (-0.7 MPa)
10.2 SRP161829 SRR7842018 Analysis of arabidopsis mutants tor/lst8/yak1/maktor
10.2 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP297585 SRR13239290 mRNA profiling of Trihelix transcription factor ASIL mutants at the late heart stage embryos
10.2 SRP126156 SRR6347972 Equal parental contribution to the transcriptome is not equal control of embryogenesis
10.2 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.2 SRP220476 SRR10072751 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
10.2 SRP301115 SRR13397336 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
10.2 SRP101641 SRR5330630 Chloroplast signalling gates thermotolerance in Arabidopsis
10.2 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
10.2 SRP100064 SRR5263213 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 SRP100064 SRR5263218 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
10.2 ERP116123 ERR3414896 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 SRP097877 SRR5205700 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 ERP116123 ERR3414897 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.2 SRP277946 SRR12469847 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP111550 SRR5817852 Transcriptome analysis using RNA sequencing conducted for wild type (Col-0), ahl10-1 and rrp6l1-2 mutant under control conditions and after 96 h at moderate low water potential (-0.7 MPa)
10.2 SRP125388 SRR6312297 Transcriptome dynamics at Arabidopsis graft junctions reveal an intertissue recognition mechanism that activates vascular regeneration
10.2 SRP277946 SRR12469637 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP104760 SRR5467188 Interactions between effector-triggered immunity (ETI) and pattern-triggered immunity (PTI) in an Arabidopsis dde2 ein2 pad4 sid2 mutant
10.2 SRP187062 SRR8645802 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
10.1 ERP116123 ERR3414898 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.1 SRP277946 SRR12469862 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP277946 SRR12470057 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP126156 SRR6347979 Equal parental contribution to the transcriptome is not equal control of embryogenesis
10.1 SRP108634 SRR5646720 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
10.1 ERP015521 ERR1406281 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
10.1 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.1 SRP325022 SRR14877282 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
10.1 SRP118634 SRR6059767 Comparison between ethylene signaling regulated transcriptome with glucose-TOR or glucose-HXK1 regulated transcriptome
10.1 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP286390 SRR12773636 Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq
10.0 ERP116123 ERR3414895 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
10.0 SRP361760 SRR18163182 The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
10.0 SRP102178 SRR5360869 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 SRP149815 SRR7267224 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
10.0 SRP108880 SRR6333617 Spatial control of gene expression by miR319-regulated TCP transcription factors in leaf development
10.0 SRP091641 SRR4426859 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
10.0 SRP093767 SRR5045339 Transcriptome analysis after knocking down class III HD ZIP transcription factors in SAM
10.0 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP357889 SRR17847305 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
10.0 SRP267870 SRR12046059 Single-cell RNA-seq data of Arabidopsis root
10.0 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP154323 SRR7536271 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
10.0 SRP154323 SRR7536273 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
10.0 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
10.0 SRP033023 SRR1030244 Analysis of the RDR6-dependent ein5 ski2 transcriptome profile in Arabidopsis
10.0 SRP238086 SRR10733519 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
10.0 SRP017386 SRR627675 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.0 SRP047297 SRR1578876 Quantitative trait loci mapping and transcriptome analysis reveal candidate genes regulating the response to ozone in Arabidopsis thaliana
10.0 SRP162520 SRR7899145 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
9.9 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
9.9 ERP118109 ERR3624456 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.9 SRP091641 SRR4426855 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
9.9 SRP378009 SRR19505581 Transcriptional Reprogramming during Floral Fate Acquisition III
9.9 SRP114806 SRR5894448 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.9 SRP090458 SRR4295886 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
The output is the 100 samples with the largest contribution to the coexpression.



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