Expression viewer

Gene annotation for CYP78A8

Platform:
Species ath
Symbol CYP78A8
Function* cytochrome P450, family 78, subfamily A, polypeptide 8
Entrez Gene ID* 839233
Other ID At1g01190




Expression pattern of CYP78A8



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.7 ERP114064 ERR3185046 RNAseq analysis of Arabidopsis cell suspension culture treated with IAA, RN3 and RN4
10.7 SRP114806 SRR5894628 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.6 SRP251062 SRR11206303 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
10.6 SRP114806 SRR5894647 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.3 SRP114806 SRR5894646 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.9 SRP309537 SRR13867531 RNAseq samples of CNQX treated Arabidopsis roots regenerating at different time points.
9.9 SRP149149 SRR7227792 Coordinated regulation of pre-mRNA splicing by the SFPS-RRC1 complex to promote photomorphogenesis in Arabidopsis
9.7 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP325022 SRR14877236 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
9.4 SRP114806 SRR5894629 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.4 SRP114806 SRR5894627 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.3 SRP090458 SRR4295910 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.2 SRP251062 SRR11206311 Gene expression changes in response to UV-B and low R:FR vs low R:FR in wild-type,uvr8 and hfr1 mutants
9.2 SRP097877 SRR5205633 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.2 SRP150181 SRR7287384 Comparative gene expression analysis in the Arabidopsis thaliana root apex using RNA-seq and microarray transcriptome profiles [RNA-seq]
9.2 SRP277946 SRR12470195 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 SRP033661 SRR1046918 Root transcriptomes for the 19 parents of the Arabidopsis thaliana MAGIC lines
9.1 SRP114806 SRR5894397 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.1 SRP114806 SRR5894648 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP325022 SRR14877228 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.9 SRP325022 SRR14877235 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.9 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
8.8 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.7 SRP234996 SRR10603597 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
8.7 SRP114806 SRR5894548 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.7 SRP361795 SRR18163829 Clock controlled and cold induced CDF6 alters growth and development to changing temperatures
8.6 SRP056607 SRR1942844 Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
8.6 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP056607 SRR1942843 Potential role of natural variation in the Arabidopsis CBF Pathway contributing to local adaptation of ecotypes collected from Italy and Sweden
8.6 SRP357889 SRR17847308 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
8.6 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
8.6 SRP324081 SRR14813587 ARATH-IN-OUT
8.6 SRP362867 SRR18254720 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
8.5 SRP253504 SRR11359530 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
8.5 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
8.4 SRP234996 SRR10603596 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
8.4 SRP114806 SRR5894496 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.4 SRP325022 SRR14877226 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.4 SRP172180 SRR8275222 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
8.4 SRP114806 SRR5894522 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.4 SRP365415 SRR18441283 Transcriptome profiling of Arabidopsis roots upon lateral root induction in WT and TOR knock down [dataset1]
8.4 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP361760 SRR18163194 The Dynamic Proteome in Arabidopsis Thaliana Early Embryogenesis
8.3 SRP237325 SRR10676655 Florigen family chromatin recruitment, competition and targets [RNA-Seq]
8.3 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.3 SRP114806 SRR5894462 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.3 SRP051592 SRR1736203 A mechanistic linkage between low CO2 and evolution of C4 photosynthesis
8.3 SRP051592 SRR1736213 A mechanistic linkage between low CO2 and evolution of C4 photosynthesis
8.2 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
8.2 SRP351935 SRR17295821 Influence of the downregulation of the MARS lncRNA (AT5G00580) of the response to Abscisic acid (ABA) in Arabidopsis
8.2 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP255966 SRR11523470 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
8.2 SRP149815 SRR7265981 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
8.2 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.2 SRP229635 SRR10435459 An intact heterotrimeric G-Protein complex is required for the N-acylethanolamine-induced, transcriptionally-mediated chloroplast response in developing Arabidopsis seedlings
8.2 SRP114806 SRR5894690 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.1 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
8.1 SRP325022 SRR14877229 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.1 SRP325022 SRR14877234 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.1 SRP114806 SRR5894463 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.1 SRP065316 SRR2828728 Correlative Controls of Seeds over Maternal Growth and Senescence in Arabidopsis
8.1 SRP286187 SRR12764912 The mRNA expression profiles of the hypocotyl and root in WT and hy5
8.1 SRP150181 SRR7287381 Comparative gene expression analysis in the Arabidopsis thaliana root apex using RNA-seq and microarray transcriptome profiles [RNA-seq]
8.1 SRP150181 SRR7287382 Comparative gene expression analysis in the Arabidopsis thaliana root apex using RNA-seq and microarray transcriptome profiles [RNA-seq]
8.1 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP090458 SRR4295911 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.0 SRP172180 SRR8275312 Transcript profiles of developing Arabidopsis dgat1-1 mutant seed
8.0 SRP299921 SRR13338328 Transcriptome profiles of different light-signaling mutants
8.0 SRP097877 SRR5205803 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.0 SRP114806 SRR5894399 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.0 SRP306749 SRR13724780 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
8.0 SRP033371 SRR1508246 Natural epigenetic polymorphisms lead to intraspecific variation in Arabidopsis gene imprinting: allele specific mRNA-seq expression profiling in Arabidopsis thaliana Col, Ler, and Cvi parental and reciprocal F1 hybrid embryo and endosperm
8.0 SRP308941 SRR13835579 The INO80 chromatin remodeling complex promotes thermomorphogenesis by connecting H2A.Z eviction and active transcription in Arabidopsis[RNA-seq]
8.0 SRP285090 SRR12697055 Differential alteration of plant functions by homologous fungal candidate effectors
7.9 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP193460 SRR8944909 Selective egg cell polyspermy bypasses the triploid block
7.9 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
7.9 SRP238086 SRR10733517 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
7.9 SRP093582 SRR5040383 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
7.9 SRP100064 SRR5262998 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
7.9 SRP100064 SRR5263002 Genetic Dissection of the Spaceflight Transcriptome Responses in Plants: are some responses unnecessary?
7.9 SRP090457 SRR4295787 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or flg22 under full and low phosphate conditions
7.9 SRP097877 SRR5205725 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
7.9 SRP277946 SRR12469713 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.9 SRP114806 SRR5894525 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
7.9 SRP114806 SRR5894657 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
7.9 SRP253436 SRR11356180 Transcriptome profiling of Arabidopsis tac1 and lazy1 mutant shoot tips under normal and gravistimulated conditions
7.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
7.8 ERP118109 ERR3624406 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
7.8 SRP161596 SRR7822638 Identification of regulators of vascular proliferation
7.8 SRP114806 SRR5894497 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
7.8 SRP095347 SRR5120337 Genetic influences on gene expression in Arabidopsis thaliana
7.8 SRP311462 SRR14022126 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
7.8 SRP311462 SRR14022137 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
7.8 SRP311462 SRR14022141 Global analysis of RNA-dependent RNA Polymerase-dependent small RNAs reveals new substrates and functions for these proteins and SGS3 in Arabidopsis
7.8 SRP190896 SRR8850908 mRNA sequencing of msh1 memory line and non-memory (normal looking) sibling plants with isogenic Col-0 wild-type control in Arabidopsis
7.8 SRP237791 SRR10704369 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
7.8 SRP093582 SRR5040384 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
The output is the 100 samples with the largest contribution to the coexpression.



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