Expression viewer

Gene annotation for AT1G01180

Platform:
Species ath
Symbol AT1G01180
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Entrez Gene ID* 839239
Other ID At1g01180




Expression pattern of AT1G01180



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.0 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.5 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
10.3 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.2 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.2 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
9.8 SRP277946 SRR12470075 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP199288 SRR9113093 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.7 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.6 SRP169564 SRR8206385 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
9.6 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP108542 SRR5640559 Gene expression profiling of the Arabidopsis glucosinolate deficient mutants, ref5-1 and ref2-1 and med5 mutants
9.5 SRP103736 SRR5440785 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.5 SRP266133 SRR11934683 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.5 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.4 SRP154323 SRR7536247 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [DPI]
9.4 SRP267870 SRR12046066 Single-cell RNA-seq data of Arabidopsis root
9.4 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
9.4 SRP136817 SRR6919899 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq gIR vs mock wt]
9.4 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.3 SRP267870 SRR12046065 Single-cell RNA-seq data of Arabidopsis root
9.3 SRP051513 SRR1734308 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
9.3 ERP118109 ERR3624341 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.3 SRP199288 SRR9113095 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.3 SRP277946 SRR12469847 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.3 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.3 SRP104119 SRR5452983 Time course of the Arabidopsis thaliana root meristem
9.3 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.3 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
9.3 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.3 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
9.3 SRP230790 SRR10502535 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
9.3 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
9.3 SRP201971 SRR9331196 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
9.3 SRP071947 SRR3234398 Genome-wide analysis of transcription, H2A.Z, nucleosomes and HSF1 dynamics in response to temperature increase in Arabidopsis thaliana [RNA-seq I]
9.2 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.2 SRP029598 SRR978410 Arabidopsis thaliana Transcriptome under Salt Stress
9.2 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP158306 SRR7695214 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.2 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.2 SRP051513 SRR1734318 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
9.2 SRP365283 SRR18430931 Time-series RNAseq analysis following lateral root induction by gravistimulation
9.2 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP158306 SRR7695121 Characterizing Epigenetic Changes in Methylation Mutants (elp2-5 and met1-7) in Response to Spaceflight. [RNA-Seq]
9.2 SRP078926 SRR3931163 Arabidopsis thaliana Transcriptome or Gene expression
9.2 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
9.2 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.2 SRP244461 SRR10959657 CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2) peptide induces SCHENGEN3 (SGN3) receptor-kinase dependent transcriptional changes
9.2 SRP191092 SRR8859567 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a 185-members bacterial synthetic community under full and low phosphate conditions
9.2 SRP266133 SRR11934487 Two unequally redundant 'helper' immune receptor families mediate Arabidopsis intracellular 'sensor' immune receptor functions
9.1 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.1 SRP083970 SRR4115395 The Cytoplasmic mRNA Decay Landscape of Arabidopsis Seedlings [RNA-seq]
9.1 SRP149815 SRR7266250 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
9.1 SRP126574 SRR6369439 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.1 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.1 SRP050945 SRR1696837 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
9.1 SRP277946 SRR12469962 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 SRP051763 SRR1744360 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.1 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
9.1 SRP279501 SRR12558711 Leaf excision evokes an ultradian gene expression rhythm to prime de novo root regeneration
9.1 SRP026541 SRR926197 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
9.1 SRP234996 SRR10603595 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
9.0 SRP170953 SRR8249036 Gene Expression Atlas of Embryo Development in Arabidopsis
9.0 ERP116123 ERR3414913 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.0 SRP277946 SRR12470057 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP051763 SRR1744362 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
9.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.0 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
9.0 SRP082532 SRR4048221 WRKY transcription factors in early MAMP-triggered immunity (RNA-Seq)
9.0 SRP028855 SRR953028 Arabidopsis thaliana Transcriptome or Gene expression
9.0 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP277946 SRR12470169 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP052858 SRR1773571 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
9.0 SRP127000 SRR6388213 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0) and 1 day after culture (DAC) from 9-day-old, 12-day-old and 15-day-old Col-0 seedlings
9.0 ERP116123 ERR3414914 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.0 SRP035269 SRR1105596 RNASeq of Developing Arabidopsis Seeds Producing Hydroxy-Fatty Acids
9.0 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP093582 SRR5040383 Arabidopsis thaliana strain:Col-0 Transcriptome or Gene expression
9.0 ERP118109 ERR3624391 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.0 SRP194106 SRR8983759 Arabidopsis thaliana 35S:ANT-GR Transcriptome
9.0 SRP191813 SRR8875217 Investigation of different gene expression of putative tt mutants under AIC condition using RNA-seq
9.0 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.0 SRP150771 SRR7357998 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
9.0 SRP197318 SRR9034708 Transcriptomics of the plant growth regulator Heatin
9.0 SRP090458 SRR4295829 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
9.0 SRP126574 SRR6369444 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.0 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.0 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
9.0 SRP169069 SRR8197914 Regulation of xylem fiber differentiation by gibberellins through DELLA-KNAT1 interaction
8.9 SRP068652 SRR3109694 SHORT-ROOT Deficiency Alleviates the Cell Death Phenotype of the Arabidopsis catalase2 Mutant under Photorespiration-Promoting Conditions
8.9 ERP123522 ERR4470940 RNA-seq of a time series experiment of leaf 3 tissue (primordia / leaf blade) of Arabidopsis plants grown under EoD FR since day 6, since day 18 or under WL conditions.
8.9 SRP234996 SRR10603597 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
The output is the 100 samples with the largest contribution to the coexpression.



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