Expression viewer

Gene annotation for KCS1

Platform:
Species ath
Symbol KCS1
Function* 3-ketoacyl-CoA synthase 1
Entrez Gene ID* 839395
Other ID At1g01120




Expression pattern of KCS1



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
14.4 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
14.4 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
14.1 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 SRP021196 SRR1610504 RNA-Seq of single cells from the Arabidopsis root
13.2 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.2 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
13.0 SRP277946 SRR12469632 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
13.0 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
12.8 SRP222555 SRR10148645 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
12.8 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
12.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.7 SRP090458 SRR4295873 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
12.7 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.7 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.6 SRP267137 SRR12005728 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.6 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
12.5 SRP189792 SRR8800695 Role of AtMLKLs in response to powdery mildew fungus
12.5 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.4 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
12.4 SRP108542 SRR5640559 Gene expression profiling of the Arabidopsis glucosinolate deficient mutants, ref5-1 and ref2-1 and med5 mutants
12.4 SRP162520 SRR7899145 Transcriptome-wide analysis of gene expression using detached first-pair rosette leaves before culture (time 0), at 10min to 12h after detachment Col-0, coi1-2 and sdg8-2 seedlings.
12.4 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
12.3 ERP015521 ERR1406298 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
12.3 SRP244078 SRR10953385 Conserved Arabidopsis response to oviposition and crude egg extract treatment
12.3 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
12.3 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
12.3 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP267137 SRR12005733 ConnecTF: A platform to integrate validated transcription factor-target interactions to build and refine gene regulatory networks
12.3 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
12.2 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
12.2 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
12.2 SRP139789 SRR6989662 DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis [RNA-seq]
12.2 SRP051763 SRR1744360 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
12.2 SRP223642 SRR10200445 Control of root thermomorphogenesis by systemic and local regulatory signals (18h RNA-seq)
12.2 SRP090458 SRR4295852 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
12.2 SRP151817 SRR7465437 Genome-wide identification of putative translation regulator cis-Natural Antisense Transcripts in Arabidopsis thaliana
12.2 SRP201761 SRR9320303 Time course of the Arabidopsis root stem cells
12.1 SRP187477 SRR8667497 A role for PICKLE in the regulation of cold stress response in Arabidopsis
12.1 SRP238086 SRR10733519 mRNA sequencing from Arabidopsis mutants and transgenic plants in the Col-0 accession
12.1 SRP237340 SRR10677214 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
12.1 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
12.1 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
12.1 SRP238842 SRR10769009 Next Generation Sequencing Facilitates Quantitative Analysis of in 14-day-old wt, brm-1, brm-3, brip1, brip2, brip1 brip2, brip1 brip2 brm-3 and brip1 brip2 brm-1 seedlings.
12.1 SRP188270 SRR8717636 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
12.1 SRP222555 SRR10148637 Circadian clock regulation of alternative splicing and alternative polyadenylation in Arabidopsis thaliana
12.1 SRP059744 SRR2072729 Identification of mRNAs Regulated in Response to Transcriptional Activation of the Arabidopsis ABA INSENSITIVE GROWTH 1 (ABIG1) Transcription Factor cDNA
12.1 SRP073711 SRR3418003 RNA-seq of abscisic acid-reponsive transcription factors
12.1 SRP238608 SRR10760420 Gene expression profiling (RNA-seq) in wild-type Arabidopsis seedlings in response to heat acclimation and heat shock
12.1 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.0 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
12.0 SRP277943 SRR12469378 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
12.0 SRP033660 SRR1046855 Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions
12.0 SRP306749 SRR13724781 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_11]
12.0 SRP149815 SRR7266250 Plastic Transcriptomes Stabilize Immunity to Pathogen Diversity
12.0 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 SRP187381 SRR8662133 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
12.0 SRP052029 SRR1752182 Transcriptional response to UV treatment in several Arabidopsis thaliana accessions
12.0 SRP169069 SRR8197914 Regulation of xylem fiber differentiation by gibberellins through DELLA-KNAT1 interaction
12.0 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.0 ERP110082 ERR2715090 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
12.0 SRP101641 SRR5330633 Chloroplast signalling gates thermotolerance in Arabidopsis
12.0 SRP188270 SRR8717637 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
12.0 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
11.9 SRP108634 SRR5646705 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
11.9 SRP195499 SRR9016804 Illumina Sequencing of Wild Type, fip37L, cpsf30-3 and cpsf30-1 mutant plants
11.9 SRP277946 SRR12469628 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP255966 SRR11523470 Whole genome RNA-sequencing from roots of Arabidopsis thaliana wild-type and stop1 exposed to low pH, low phosphate (Pi), Aluminum and Iron excess conditions.
11.9 SRP043607 SRR1463329 A transcriptional map following the developmental trajectory of the Arabidopsis stomatal lineage
11.9 SRP097877 SRR5205632 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.9 ERP110082 ERR2715089 Arabidopsis requires PECTINACETYLESTERASE 9 for constitutive but not induced defenses against Myzus persicae aphids
11.9 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
11.9 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.9 ERP122569 ERR4298111 Transcriptional analysis of polyamine responsive genes
11.9 SRP214325 SRR9672829 Temporal comparison of leaf transcriptomes between early-flowering Arabidopsis thaliana atx1/atx3/atx4 triple mutants and vegetative WT Col-0 plants of the same age.
11.9 SRP219435 SRR10027510 The LRX-RALF-FER cell wall integrity sensing module controls plant growth and salt stress responses by modulating multiple plant hormones
11.9 SRP108492 SRR5642281 Identification of differentially expressed genes by RNA-seq in AtGRP7 overexpression and knockdown lines
11.9 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 SRP237340 SRR10677226 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
11.8 SRP136812 SRR6919642 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq DREMmodel]
11.8 SRP100712 SRR5285983 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.8 SRP149149 SRR7227788 Coordinated regulation of pre-mRNA splicing by the SFPS-RRC1 complex to promote photomorphogenesis in Arabidopsis
11.8 SRP306303 SRR13706063 Antagonistic activities of co-transcriptional regulators within an early developmental window sets quantitative FLC expression
11.8 SRP093697 SRR5038590 RNA-seq of Arabidopsis thaliana seedlings treated with MeJA or BTH
11.8 SRP261821 SRR11795802 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
11.8 SRP097877 SRR5205619 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.8 SRP060410 SRR2088039 Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
11.8 SRP073724 SRR3419761 Study of primary transcriptional changes induced by EDS1/PAD4 in Arabidopsis using an estradiol-inducible system
11.8 SRP082470 SRR4046130 SPLICING FACTOR FOR PHYTOCHROME SIGNALING promotes photomorphogenesis by regulating alternative splicing in Arabidopsis
11.8 SRP277946 SRR12470187 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
11.8 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.8 SRP103736 SRR5440843 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.8 SRP365283 SRR18430925 Time-series RNAseq analysis following lateral root induction by gravistimulation
11.8 ERP106738 ERR2286756 Effects of FT on FD during the transition to flowering at the SAM in Arabidopsis thaliana
11.8 SRP114806 SRR5894655 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.8 SRP195499 SRR9016802 Illumina Sequencing of Wild Type, fip37L, cpsf30-3 and cpsf30-1 mutant plants
11.8 SRP301115 SRR13397371 Title: Leaf transcriptomics of Catalan A. thaliana demes under alkaline and carbonated stress at 3h and 48 hours.
The output is the 100 samples with the largest contribution to the coexpression.



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