Expression viewer

Gene annotation for AT1G01640

Platform:
Species ath
Symbol AT1G01640
Function* BTB/POZ domain-containing protein
Entrez Gene ID* 839534
Other ID At1g01640




Expression pattern of AT1G01640



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.6 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
9.5 SRP277946 SRR12469855 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.4 SRP114806 SRR5894386 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.3 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.1 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
9.0 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.0 SRP277946 SRR12470065 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.9 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
8.8 SRP325022 SRR14877257 Transcriptional activation of auxin biosynthesis drives developmental reprogramming of differentiated cells
8.8 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP050945 SRR1696858 Gibberellin and Strigolactone signaling interplay in Arabidopsis thaliana
8.8 SRP371011 SRR18808229 Dynamics of mRNA fate during light stress and recovery: from transcription to stability and translation
8.8 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.8 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.7 SRP090458 SRR4295857 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.7 SRP277946 SRR12470184 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.6 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.5 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
8.5 SRP276408 SRR12401353 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
8.5 SRP114806 SRR5894660 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.5 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
8.5 SRP101641 SRR5330575 Chloroplast signalling gates thermotolerance in Arabidopsis
8.4 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
8.4 SRP044776 SRR1523884 High-resolution tissue-specific analysis of the Arabidopsis transcriptome in response to shade
8.4 SRP277946 SRR12470066 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.4 SRP126290 SRR6356048 RNA-Seq Analysis of Genes Differentially Expressed across temporal and spatial deposition of wall ingrowths in Arabidopsis Phloem Parenchyma Transfer Cells
8.4 SRP370448 SRR18767860 Arabidopsis thaliana Transcriptome or Gene expression
8.4 SRP090458 SRR4295942 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
8.4 SRP126574 SRR6369438 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.4 SRP021196 SRR1610488 RNA-Seq of single cells from the Arabidopsis root
8.3 SRP133385 SRR6767654 Time-course transcriptomic analysis of Arabidopsis response to high light stress
8.3 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.3 SRP101641 SRR5330566 Chloroplast signalling gates thermotolerance in Arabidopsis
8.3 SRP277946 SRR12470191 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
8.3 SRP271641 SRR12211735 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
8.2 SRP339340 SRR16119325 Single seeds exhibit transcriptional heterogeneity during secondary dormancy induction
8.2 SRP276408 SRR12401352 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
8.2 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP277946 SRR12470072 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.2 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.2 SRP114806 SRR5894725 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.2 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
8.2 SRP234996 SRR10603594 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
8.2 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
8.2 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
8.2 SRP254177 SRR11429290 Time course of brassinolide treatment on Arabidopsis seedlings
8.2 SRP169564 SRR8206401 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
8.1 SRP365283 SRR18430906 Time-series RNAseq analysis following lateral root induction by gravistimulation
8.1 SRP093766 SRR5045312 Transcriptomic analysis of dorso-ventral cell-types of Arabidopsis shoot apical meristem
8.1 SRP297920 SRR13253077 Transcript analysis under phosphate and iron deprivation in 7 day old Arabidopsis thaliana seedlings
8.1 SRP326522 SRR15015732 Cell-wall damage activates DOF transcription factors to promote wound healing and tissue regeneration in Arabidopsis thaliana
8.1 SRP173766 SRR8335144 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
8.1 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 ERP108714 ERR2576897 Transcriptome analysis of khd-1, spen-1 and hub1-4 Arabidopsis mutants
8.1 SRP114806 SRR5894427 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
8.1 SRP286047 SRR12762103 The impact of the genes BBX32 and HY5 on the high light - responsive transcriptome of Arabidopsis thaliana
8.1 SRP113403 SRR5860307 LHP1 interacts with ATRX through plant-specific domains at specific loci targeted by PRC2
8.1 SRP218723 SRR9995099 Plant 22-nt siRNAs mediate translational repression and stress adaptation
8.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.1 SRP193460 SRR8944887 Selective egg cell polyspermy bypasses the triploid block
8.1 SRP193460 SRR8944889 Selective egg cell polyspermy bypasses the triploid block
8.1 SRP097877 SRR5205673 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
8.1 SRP188810 SRR8749809 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
8.1 SRP234996 SRR10603595 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
8.0 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP199288 SRR9113159 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
8.0 SRP285090 SRR12697057 Differential alteration of plant functions by homologous fungal candidate effectors
8.0 SRP315390 SRR14275129 The E3 Ubiquitin Ligase AFF1 targets ARF19 to the proteasome
8.0 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
8.0 SRP091641 SRR4426533 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
8.0 ERP112062 ERR2900248 RNA-seq analysis of frs7;frs12;ninja-1 triple loss-of-function seedlings
8.0 ERP118500 ERR3668664 Transcription profiling of Arabidopsis thaliana leaves as reaction to caterpillar (Trichoplusia ni) feeding and fungi (Laccaria bicolor) infection of the roots
8.0 SRP253504 SRR11359542 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
8.0 SRP234996 SRR10603596 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
8.0 SRP126574 SRR6369503 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
8.0 SRP172049 SRR8271804 Arabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. [RNA-Seq]
8.0 SRP277943 SRR12469327 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
8.0 SRP126574 SRR6369434 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
7.9 SRP313445 SRR14142059 A RALF-like peptide EaF82 derived from Epipremnum aureum inhibits pollen development in Arabidopsis and tobacco
7.9 SRP108542 SRR5640559 Gene expression profiling of the Arabidopsis glucosinolate deficient mutants, ref5-1 and ref2-1 and med5 mutants
7.9 SRP114806 SRR5894412 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
7.9 SRP090458 SRR4295860 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
7.9 SRP018266 SRR653595 Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome
7.9 SRP048829 SRR1610323 Enhanced Salicylic Acid Biosynthesis Is Involved in Heterosis for Bacterial Defense in Arabidopsis
7.9 SRP218723 SRR9995098 Plant 22-nt siRNAs mediate translational repression and stress adaptation
7.9 SRP201971 SRR9331194 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
7.9 SRP173766 SRR8335145 Genome-wide analysis of transcription and PIF7 DNA binding in response to long days with daily oscillating temperatures in Arabidopsis thaliana
7.9 SRP266469 SRR11954324 RNA sequencing reveals the genetic relationship between TOPPs and its regulatory subunit PP1R3 in Arabidopsis thaliana
7.9 SRP017386 SRR627629 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
7.9 SRP220476 SRR10072664 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
7.9 SRP237791 SRR10704370 Ustilago maydis effector Jsi1 interacts with Topless corepressor, hijacking plant JA/ET signaling
7.8 SRP103736 SRR5440842 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
7.8 SRP276408 SRR12401354 Analysis of differential gene expression in mutant and overexpressing lines of DNE1
7.8 SRP018266 SRR653596 Genome-wide analysis of LINK1 and LINK2 effects on the Arabidopsis transcriptome
7.8 SRP126162 SRR6348174 Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis
7.8 SRP277943 SRR12469328 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
The output is the 100 samples with the largest contribution to the coexpression.



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