Expression viewer

Gene annotation for AT1G29980

Platform:
Species ath
Symbol AT1G29980
Function* choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)
Entrez Gene ID* 839877
Other ID At1g29980




Expression pattern of AT1G29980



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
12.7 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.1 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.9 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
11.7 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.5 SRP114806 SRR5894659 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
11.2 SRP100712 SRR5285841 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
11.2 SRP100938 SRR5304741 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
11.1 SRP311610 SRR14028738 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
11.1 SRP311610 SRR14028736 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 SRP311610 SRR14028737 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
11.0 SRP311610 SRR14028739 Auxin and ABA responsiveness in the root or the shoot of dark-grown Arabidopsis thaliana 5 day old seedlings in the aba2-3 or wild-type (Col-O) background
10.8 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.8 SRP154099 SRR7529159 Transcriptome analysis of Arabidopsis thaliana photoreceptor mutants impaired in UV and blue light signaling
10.8 SRP189792 SRR8800692 Role of AtMLKLs in response to powdery mildew fungus
10.6 SRP017386 SRR627642 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.4 SRP234996 SRR10603587 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.4 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.4 SRP017386 SRR627641 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
10.4 SRP052858 SRR1773569 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
10.3 SRP103736 SRR5440786 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.3 SRP277946 SRR12469638 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.3 SRP222258 SRR15122126 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
10.3 SRP306740 SRR13724696 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_16]
10.3 SRP234996 SRR10603586 Naked1 targets Topless to up-regulate Auxin signaling and suppress immunity
10.2 SRP114806 SRR5894396 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 SRP114806 SRR5894398 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.2 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
10.2 SRP166137 SRR8078926 RNA-seq data on Botrytis treated Col-0, era1-2, snrk2.236 and lacs2.3 (Arabidopsis thaliana)
10.2 SRP066432 SRR2925762 Identification of MEDIATOR16 as the Arabidopsis COBRA suppressor, MONGOOSE1
10.2 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.2 SRP277946 SRR12470193 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.1 SRP126574 SRR6369414 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
10.1 SRP237340 SRR10677210 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
10.1 SRP100712 SRR5285827 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.1 SRP114806 SRR5894429 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
10.1 SRP100938 SRR5304727 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
10.1 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 SRP351684 SRR17281133 Transcriptomic profile of FERONIA mutant treated with Aradopside
10.1 SRP103736 SRR5440897 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
10.1 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
10.0 SRP090458 SRR4295893 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions [PBI_preTreat]
10.0 SRP237340 SRR10677234 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
10.0 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.0 SRP187477 SRR8667497 A role for PICKLE in the regulation of cold stress response in Arabidopsis
10.0 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
10.0 SRP051513 SRR1734301 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
10.0 SRP136641 SRR6908926 Gene expression profiling (RNA-seq) in wild-type and bdrs triple mutant Arabidopsis seedlings in response to light or to a heat shock
10.0 SRP277946 SRR12469643 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
10.0 SRP100712 SRR5285838 Plant development on ISS differes from the development on the ground and is influenced by the genetic background.
10.0 ERP015521 ERR1406298 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.9 SRP100938 SRR5304738 During development, the Sku6 mutant roots engage different genes than wild type Col-0 roots, either on the ground or in spaceflight.
9.9 SRP060410 SRR2088041 Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
9.9 SRP151058 SRR7408202 botrytisxn - Nitrogen nutrition and pathogen susceptibility: priming by metabolism.
9.9 SRP277946 SRR12469640 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP103817 SRR5444386 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
9.9 SRP098906 SRR5231013 The PIF4 controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana
9.8 SRP306752 SRR13724845 The role of ATXR6 expression in modulating genome stability and transposable element repression in Arabidopsis [RNA-seq_20]
9.8 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP267870 SRR12046122 Single-cell RNA-seq data of Arabidopsis root
9.8 SRP128639 SRR6456399 Transcriptome analysis of isoxaben-induced loss of cell wall integrity in Arabidopsis seedling liquid culture
9.8 SRP267870 SRR12046121 Single-cell RNA-seq data of Arabidopsis root
9.8 SRP261821 SRR11795799 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
9.8 SRP331164 SRR15347021 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
9.8 SRP150771 SRR7357981 RNA Polymerase II read-through promotes expression of neighboring genes in SAL1-PAP-XRN retrograde signaling
9.8 SRP277946 SRR12469642 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.8 SRP097877 SRR5205673 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.8 SRP253507 SRR11359746 Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis
9.8 SRP277946 SRR12469766 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
9.8 SRP220476 SRR10072712 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.8 SRP114806 SRR5894427 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.7 SRP222258 SRR15122078 A Genome-Scale TF-DNA Interaction Network for Transcriptional Regulation of Arabidopsis Primary and Specialized Metabolism
9.7 SRP272650 SRR12272457 Transcriptome analysis of TPR1/TPL mutant lines during Pst AvrRps4- triggered immunity
9.7 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.7 SRP097877 SRR5205659 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.7 SRP103817 SRR5444391 Signature of coevolution between determinants of defense and life span in Arabidopsis thaliana
9.7 SRP095347 SRR5120430 Genetic influences on gene expression in Arabidopsis thaliana
9.7 SRP101274 SRR5309023 During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.
9.7 SRP253504 SRR11359543 Time-lapse RNA-seq analysis to study the gene networks in cell fate transition in de novo root regeneration from detached Arabidospis leaves
9.7 SRP267870 SRR12046124 Single-cell RNA-seq data of Arabidopsis root
9.7 SRP351690 SRR17281225 Somatic DNA demethylation generates tissue-specific methylation states and impacts flowering time [RNA-seq]
9.7 SRP187381 SRR8662009 Transcriptome responses to the natural phytotoxin t-chalcone in Arabidopsis thaliana L.
9.7 SRP327928 SRR15100972 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
9.6 SRP277943 SRR12469289 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of a community of commensal bacteria [RST]
9.6 SRP188270 SRR8717650 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
9.6 SRP114806 SRR5894431 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.6 SRP065450 SRR2850580 Temporal and spatial domain-specific transcriptomic analysis of a vital reproductive meristem in Arabidopsis thaliana
9.6 SRP277946 SRR12470185 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP267870 SRR12046123 Single-cell RNA-seq data of Arabidopsis root
9.6 SRP214585 SRR9681240 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.6 SRP188270 SRR8717652 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
9.6 SRP097877 SRR5205723 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.6 SRP277946 SRR12469969 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
The output is the 100 samples with the largest contribution to the coexpression.



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