Expression viewer

Gene annotation for SKP2B

Platform:
Species ath
Symbol SKP2B
Function* RNI-like superfamily protein
Entrez Gene ID* 844036
Other ID At1g77000




Expression pattern of SKP2B



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
10.6 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.5 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.4 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
10.2 SRP051763 SRR1744361 Hybrid Mimics and Hybrid Vigor in Arabidopsis (F4 data)
10.2 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
10.2 SRP097877 SRR5205694 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
10.1 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
10.1 SRP310860 SRR13977116 Spider mite egg extract modifies Arabidopsis response to future infestations
10.1 SRP277946 SRR12470180 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.9 SRP114806 SRR5894661 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.8 SRP277946 SRR12470058 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.8 SRP277946 SRR12469855 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.7 SRP346154 SRR16948975 Plants grow in lunar regolith
9.6 SRP277946 SRR12470056 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP277946 SRR12470201 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.6 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.6 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
9.6 SRP193460 SRR8944866 Selective egg cell polyspermy bypasses the triploid block
9.6 SRP220476 SRR10072747 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.6 SRP277946 SRR12469854 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
9.5 SRP237340 SRR10677198 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.5 SRP254177 SRR11429303 Time course of brassinolide treatment on Arabidopsis seedlings
9.5 SRP255728 SRR11510194 Transcriptome analysis of EDS1 4h after Pst AvrRps4- triggered immunity
9.5 SRP277946 SRR12469860 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP277946 SRR12470057 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP277946 SRR12470087 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.5 SRP095347 SRR5120422 Genetic influences on gene expression in Arabidopsis thaliana
9.5 ERP116123 ERR3414914 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.5 ERP116123 ERR3414913 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.5 SRP108336 SRR5631429 Genome-wide gene expression profile from Arabidopsis epiRILs, epiHybrids and Colombia wild type
9.5 SRP097877 SRR5205630 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.5 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP149670 SRR7252675 Effect of GA on PAC and PAO1 treated Arabidopsis seeds
9.4 SRP132408 SRR6684450 Direct control of SPEECHLESS by PIF4 in the high temperature response of stomatal development
9.4 SRP277946 SRR12470075 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.4 SRP193460 SRR8944863 Selective egg cell polyspermy bypasses the triploid block
9.4 SRP194106 SRR8983767 Arabidopsis thaliana 35S:ANT-GR Transcriptome
9.4 SRP095347 SRR5120428 Genetic influences on gene expression in Arabidopsis thaliana
9.4 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
9.4 SRP051513 SRR1734308 Alterations to hormone regulated defense and stress response networks contribute to the greater growth of Arabidopsis F1 hybrids
9.4 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
9.4 SRP103736 SRR5440841 Fine scale time-series RNA-Seq of shoot and root responses to Nitrogen supply
9.4 ERP118109 ERR3624356 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.4 SRP114806 SRR5894429 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.4 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.4 SRP220476 SRR10072748 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.4 SRP237340 SRR10677246 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.4 SRP014482 SRR525107 Time-course RNA-seq analysis of the barley MLA1 immune receptor-mediated response to barley powdery mildew fungus Bgh in Arabidopsis thaliana
9.3 SRP199288 SRR9113158 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
9.3 SRP193460 SRR8944865 Selective egg cell polyspermy bypasses the triploid block
9.3 SRP114806 SRR5894447 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.3 SRP220476 SRR10072753 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.3 ERP015521 ERR1406301 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
9.3 SRP277946 SRR12470074 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP237340 SRR10677199 MYB30 orchestras ROS wave-triggered systemic transcriptomic responses and plant acclimation in Arabidopsis
9.3 SRP279325 SRR12546092 Coordination of microbe-host homeostasis via a crosstalk with plant innate immunity
9.3 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
9.3 ERP116123 ERR3414912 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.3 SRP334993 SRR15679200 Next Generation Sequencing Facillitates Quantitative Analysis of Wild Type and snrk1a1/a2 mutant Transcriptomes
9.3 SRP277946 SRR12469848 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP277946 SRR12470190 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP277946 SRR12470194 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 ERP116123 ERR3414911 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.3 SRP220476 SRR10072749 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.3 SRP277946 SRR12469863 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.3 ERP118109 ERR3624361 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
9.2 SRP126574 SRR6369444 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.2 SRP271641 SRR12211735 Arabidopsis thaliana ecotypes Rodasen-47 (Sweden) and Castelnuovo-12 (Italy) grown in high light and/or cold
9.2 SRP214585 SRR9681427 Transcriptome and binding data indicate that citral inhibits single strand DNA-binding proteins
9.2 SRP041308 SRR1257406 Global variation of gene expression induced by constitutive activation of the NIK receptor in Arabidopsis
9.2 ERP116123 ERR3414907 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.2 SRP149670 SRR7252676 Effect of GA on PAC and PAO1 treated Arabidopsis seeds
9.2 SRP251392 SRR11218908 Global transcriptional patterns in irr and wild-type plants
9.2 SRP220476 SRR10072750 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.2 SRP277946 SRR12470200 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP126574 SRR6369364 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
9.2 SRP114806 SRR5894525 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.2 SRP277946 SRR12470188 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.2 SRP063017 SRR2221840 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
9.2 SRP189895 SRR8816071 Transcriptomic changes in Arabidopsis thaliana upon the expression of mutated TFIIS
9.2 SRP044746 SRR3046812 Cryptochromes interact directly with PIFs to control plant growth in limiting blue light
9.2 SRP114806 SRR5894647 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
9.2 ERP116123 ERR3414910 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.2 ERP116123 ERR3414897 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.2 SRP074436 SRR3478302 Arabidopsis thaliana treatments to trigger somatic embryo formation under RNAseq
9.2 SRP187062 SRR8645806 Expression of a dominant-negative AtNEET-H89C protein disrupts iron–sulfur metabolism and iron homeostasis in Arabidopsis
9.2 SRP118634 SRR6059767 Comparison between ethylene signaling regulated transcriptome with glucose-TOR or glucose-HXK1 regulated transcriptome
9.1 SRP137763 SRR6950016 The SOG1 transcriptional activator and the MYB3R family of repressors control a complex gene network in response to DNA damage in Arabidopsis [RNA-seq t vs t0]
9.1 SRP220476 SRR10072754 Comparison of apical leaf halves of Arabidopsis thaliana PP2A-B´-mutants and wild type plants
9.1 SRP277946 SRR12469846 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 SRP277946 SRR12470067 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 SRP277946 SRR12470192 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
9.1 ERP116123 ERR3414909 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.1 SRP201971 SRR9331161 RNA-seq analysis of transcriptome reprofiling triggered by different pattern-recognition receptor types
9.1 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
9.1 ERP116123 ERR3414895 Specific functions for Mediator complex subunits from different modules in the transcriptional response of Arabidopsis thaliana to abiotic stress
9.1 SRP370448 SRR18767860 Arabidopsis thaliana Transcriptome or Gene expression
The output is the 100 samples with the largest contribution to the coexpression.



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