Expression viewer

Gene annotation for AT1G80440

Platform:
Species ath
Symbol AT1G80440
Function* Galactose oxidase/kelch repeat superfamily protein
Entrez Gene ID* 844383
Other ID At1g80440




Expression pattern of AT1G80440



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
15.7 ERP123539 ERR4471740 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
14.7 ERP123539 ERR4471742 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
13.0 SRP280005 SRR12583402 The Lys-motif receptor LYK4 mediates Enterobacter sp. SA187 triggered salt tolerance in Arabidopsis thaliana
12.9 SRP112501 SRR5831044 Combining chemical and genetic approaches to increase drought resistance in plants
12.9 SRP039091 SRR1179969 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.9 SRP097877 SRR5205721 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.7 SRP285902 SRR12747511 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
12.7 SRP097877 SRR5205700 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.5 SRP097877 SRR5205617 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.5 SRP095347 SRR5120424 Genetic influences on gene expression in Arabidopsis thaliana
12.5 SRP294481 SRR13156693 RNAseq Analysis of wild type and nrt1.13 in normal or low nitrate condition
12.4 SRP136326 SRR6941661 Knock-down of phosphoserine phosphatase gene effects rather N- than S-metabolism in Arabidopsis thaliana
12.4 SRP285902 SRR12747513 ­Schengen-pathway controls spatially separated and chemically distinct lignin deposition in the endodermis
12.4 SRP102178 SRR5360869 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.4 SRP052858 SRR1773555 Transcriptome-wide identification of Arabidopsis messenger RNAs transported between tissues
12.4 SRP327928 SRR15100992 Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function
12.4 SRP097877 SRR5205631 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.4 SRP188270 SRR8717653 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
12.3 SRP315323 SRR14272429 Agrobacterium VirE2 Protein Modulates Plant Gene Expression and Mediates Transformation from Its Location in the Cytoplasm
12.3 SRP154322 SRR7536158 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
12.3 SRP277946 SRR12470059 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.3 SRP199288 SRR9113095 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
12.3 SRP154322 SRR7536159 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
12.3 SRP095347 SRR5120250 Genetic influences on gene expression in Arabidopsis thaliana
12.3 ERP118109 ERR3624341 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
12.2 SRP010938 SRR446034 Arabidopsis thaliana strain:Columbia (Col-0) Transcriptome or Gene expression
12.2 SRP102178 SRR5360788 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
12.2 SRP126574 SRR6369494 Transcriptional Regulation of Nitrogen and Nitrogen-Related Metabolism in Arabidopsis
12.2 SRP051665 SRR1738121 Translatome analyses of opposing tissue-specific brassinosteroid signals orchestrating root meristem differentiation
12.2 SRP039091 SRR1179968 Transcriptomes for hybrids (F1s) between 18 Arabidopsis thaliana parents of the Multiparent Advanced Generation Inter-Cross (MAGIC) genetic mapping resource
12.2 SRP199288 SRR9113094 In Arabidopsis hybrids and Hybrid Mimics up-regulation of cell wall biogenesis is associated with increased plant size
12.2 SRP017386 SRR627680 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.2 SRP114806 SRR5894654 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.2 SRP230790 SRR10502556 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
12.1 SRP194106 SRR8983759 Arabidopsis thaliana 35S:ANT-GR Transcriptome
12.1 SRP154322 SRR7536161 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
12.1 SRP154322 SRR7536160 Identification and characterization of a core set of ROS wave-associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light [H2O2]
12.1 SRP155742 SRR7620901 Genome-wide validation of the direct regulated targets for 33 nitrogen-early response transcription factors
12.1 SRP277946 SRR12470075 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
12.1 SRP017386 SRR627674 Transcriptome-wide analysis of gene expression in dark-grown WT and pif mutant seedlings
12.1 SRP051393 SRR1726976 RNA-Seq of 40 single cells from the Arabidopsis root FACS sorted GFP positive cells from WOX5:GFP expressing plants
12.1 SRP108634 SRR5646720 Locus-specific control of the de novo DNA methylation pathway [mRNA-seq]
12.1 SRP063017 SRR2221835 RNA-seq analysis of Arabidopsis thaliana wild-type roots and type-A arr3,4,5,6,7,8,9,15 mutant roots non-infected and infected with Heterodera schachtii nematodes
12.1 SRP114806 SRR5894698 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
12.1 SRP188270 SRR8717656 Nitrogen and cycloheximide effects on protoplast and TF-target identification in the TARGET assay
12.1 ERP123539 ERR4471741 EVOREPRO: RNA- seq of Arabidopsis thaliana pollen developmental stages for Ler and Col ecotypes
12.1 SRP119870 SRR6166370 Transcriptomic characterization of spl7 and Col-0 ecotypes of Arabidopsis reveals new aspects of Fe-Cu crosstalk
12.1 SRP230790 SRR10502553 H3K27me3 and H3K4me3 profiles in chr4/pkr1 and WT [RNA-seq]
12.1 SRP297574 SRR13238920 mRNA profiling of Trihelix transcription factor ASIL mutants in seedlings
12.0 SRP261821 SRR11795792 Arabidopsis NRP switches off the PP6 phosphatase FyPP3 to repress auxin-mediated growth in response to abscisic acid
12.0 SRP311711 SRR14038189 Transcriptome profiling of etiolated Arabidopsis seedlings 2 days after UV-B treatment
12.0 SRP033660 SRR1046876 Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions
12.0 SRP007484 SRR309158 Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions
12.0 SRP151039 SRR7406471 transition-Transcriptome of floral transition
12.0 SRP331164 SRR15347020 The DREAM complex antagonizes WDR5a and represses the productive elongation of transcription in Arabidopsis [RNA-seq]
12.0 ERP015521 ERR1406276 Leaf transcriptomes of Arabidopsis thaliana colonized by representative phyllosphere commensals alone and in combination with the pathogen Pseudomonas syringae DC3000
11.9 SRP095347 SRR5120423 Genetic influences on gene expression in Arabidopsis thaliana
11.9 SRP285090 SRR12697065 Differential alteration of plant functions by homologous fungal candidate effectors
11.9 SRP188810 SRR8749794 RNAseq of Arabidopsis wild-type (WT)-expressing aequorin and card1-2 mutant (WT-expressing aequorin background) in response to DMBQ or DMSO treatment at 0 hr, 0.5 hr, 1 hr and 6 hr
11.9 SRP074436 SRR3478306 Arabidopsis thaliana treatments to trigger somatic embryo formation under RNAseq
11.9 SRP169564 SRR8206385 Transcriptome profiling of Arabidopsis roots upon lateral root induction upon shy2-2 or slr-1 expression
11.9 SRP114806 SRR5894724 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.9 SRP362867 SRR18254715 Robust transcriptional indicators of plant immune cell death revealed by spatio-temporal transcriptome analyses
11.9 SRP324081 SRR14813635 ARATH-IN-OUT
11.9 SRP351988 SRR17298958 MSH1 disruption in plants triggers RdDM-mediated reprogramming of phenotypic plasticity (RNA-Seq)
11.9 SRP310860 SRR13977120 Spider mite egg extract modifies Arabidopsis response to future infestations
11.9 SRP357889 SRR17847305 Transcriptomic changes upon NaCl treatment dependent on GA biosynthesis and signaling.
11.9 ERP123522 ERR4470940 RNA-seq of a time series experiment of leaf 3 tissue (primordia / leaf blade) of Arabidopsis plants grown under EoD FR since day 6, since day 18 or under WL conditions.
11.9 SRP037984 SRR1170682 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.9 SRP029957 SRR988015 Arabidopsis thaliana strain:Columbia-0 Transcriptome or Gene expression
11.9 SRP188346 SRR8723344 rnadapt-Non-coding RNAs in the adaptation of root growth to phosphate starvation
11.9 SRP136641 SRR6908911 Gene expression profiling (RNA-seq) in wild-type and bdrs triple mutant Arabidopsis seedlings in response to light or to a heat shock
11.9 SRP090416 SRR4293717 Photorespiration is crucial to the dynamic response of photosynthetic metabolism and stomatal movement to altered CO2 availability
11.8 SRP163134 SRR7954868 Transcriptional charecterization of the eds4 mutant transcriptome
11.8 SRP068171 SRR3333598 Arabidopsis thaliana cultivar:Col Transcriptome or Gene expression
11.8 ERP118109 ERR3624340 Dark-induced senescence time course of ANAC017 mutant lines in Arabidopsis
11.8 SRP248470 SRR11075180 A dynamic network reveals the novel characteristics of miRNA regulation over time in response to the ABA hormone in Arabidopsis (mRNA)
11.8 SRP277946 SRR12470189 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 SRP303743 SRR13575644 Arabidopsis thaliana Transcriptome for different potassium
11.8 SRP277946 SRR12470208 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.8 SRP189792 SRR8800760 Role of AtMLKLs in response to powdery mildew fungus
11.8 SRP248470 SRR11075181 A dynamic network reveals the novel characteristics of miRNA regulation over time in response to the ABA hormone in Arabidopsis (mRNA)
11.8 SRP257291 SRR11568014 Gene expression in Arabidopsis expressing a Hyaloperonospora arabidopsidis effector
11.8 ERP114064 ERR3185052 RNAseq analysis of Arabidopsis cell suspension culture treated with IAA, RN3 and RN4
11.8 SRP091641 SRR4426534 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.7 SRP277946 SRR12470073 RNA-seq of Arabidopsis thaliana roots exposed to the MAMP flg22 in the presence of individual commensal bacteria [MAE]
11.7 SRP102178 SRR5360859 A high temperature RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.7 SRP097877 SRR5205646 An RNA-seq dataset for studies of gene expression variation in the MAGIC line resource of Arabidopsis thaliana
11.7 SRP091641 SRR4426794 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.7 SRP007484 SRR309157 Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions
11.7 SRP189792 SRR8800802 Role of AtMLKLs in response to powdery mildew fungus
11.7 SRP254970 SRR11468712 Multifactorial stress combination
11.7 SRP033023 SRR1030244 Analysis of the RDR6-dependent ein5 ski2 transcriptome profile in Arabidopsis
11.7 SRP074436 SRR3478302 Arabidopsis thaliana treatments to trigger somatic embryo formation under RNAseq
11.7 SRP091641 SRR4426512 Time-resolved transcriptome analysis with genetic perturbations reveals a critical time window for effective plant immunity
11.7 SRP007484 SRR309162 Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions
11.7 SRP351690 SRR17281236 Somatic DNA demethylation generates tissue-specific methylation states and impacts flowering time [RNA-seq]
11.7 SRP070918 SRR3193434 Time course transcriptional profiles of the Arabidopsis thaliana response to flg22 infiltration for all combinatorial genotypes of the alleles dde2-2, ein2-1, pad4-1, and sid2-2.
11.7 SRP114806 SRR5894707 RNA-seq of Arabidopsis thaliana seedlings growing in the presence of a bacterial synthetic community under full and low phosphate conditions
11.7 ERP114064 ERR3185053 RNAseq analysis of Arabidopsis cell suspension culture treated with IAA, RN3 and RN4
The output is the 100 samples with the largest contribution to the coexpression.



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