Expression viewer

Gene annotation for LOC9269072

Platform:
Species osa
Symbol LOC9269072
Function* AP2-like ethylene-responsive transcription factor TOE3
Entrez Gene ID* 9269072
Other ID Os04g0649100




Expression pattern of LOC9269072



Normalized expression
(Base-2 logarithm)		 Experiment ID Sample ID Source Name in annotation
11.9 SRP056884 SRR1952801 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.9 SRP131107 SRR6502105 Adaptation Versus Senescence In Rice: Early Signalling Events Play A Role In Inducing Specificity And Tolerance To Salinity
11.8 SRP115210 SRR5925472 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.7 SRP041468 SRR1985021 Oryza sativa Japonica Group Transcriptome or Gene expression
11.7 SRP115210 SRR5925484 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.6 SRP320302 SRR14575466 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.6 SRP115210 SRR5925490 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.5 SRP320302 SRR14575470 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP331960 SRR15411188 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
11.4 SRP320302 SRR14575468 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.4 SRP356482 SRR17720811 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
11.4 SRP320302 SRR14575464 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.3 SRP115210 SRR5925487 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP115210 SRR5925486 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 ERP013234 ERR1142066 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.3 SRP320302 SRR14575472 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.3 SRP127575 SRR6420531 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
11.3 SRP320302 SRR14575465 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.3 ERP013234 ERR1142065 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
11.3 SRP309118 SRR13847352 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.3 SRP115210 SRR5925485 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP115210 SRR5925488 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.3 SRP320302 SRR14575475 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 SRP127575 SRR6420530 RNA-sequencing analysis of wild-type and osvil2 mutant panicles
11.2 SRP320302 SRR14575471 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.2 SRP041468 SRR1985031 Oryza sativa Japonica Group Transcriptome or Gene expression
11.2 SRP362107 SRR18189506 Oryza sativa Transcriptome or Gene expression
11.2 SRP309118 SRR13847371 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
11.2 SRP083700 SRR4098178 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.2 SRP049054 SRR1616169 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
11.2 SRP056884 SRR1952789 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.1 DRP000716 DRR002694 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.1 SRP056884 SRR1952788 Host transcriptional reprogramming across diverse strains of the rice bacterial leaf streak pathogen Xanthomonas oryzae pv.oryzicola
11.1 DRP000716 DRR002720 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
11.1 SRP320302 SRR14575473 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.1 SRP181124 SRR8469616 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.1 SRP115210 SRR5925508 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP320302 SRR14575467 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
11.1 SRP092175 SRR4457258 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.1 SRP092175 SRR4457237 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
11.1 SRP170932 SRR8247768 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
11.1 SRP258176 SRR11601219 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
11.1 SRP170932 SRR8247769 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
11.1 SRP115210 SRR5925493 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.1 SRP115210 SRR5925491 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP115210 SRR5925494 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP115210 SRR5925475 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP083700 SRR4098195 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
11.0 SRP115210 SRR5925476 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP181124 SRR8469601 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.0 SRP181124 SRR8469623 Ascorbate oxidation primes rice plants for enhanced defence against root-knot nematode Meloidogyne graminicola through jasmonate/ethylene-activation
11.0 SRP115210 SRR5925473 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP115210 SRR5925474 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP115210 SRR5925492 mRNA sequencing of whole 15 d old Oryza sativa shoots
11.0 SRP041468 SRR1985027 Oryza sativa Japonica Group Transcriptome or Gene expression
11.0 SRP309118 SRR13847378 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.9 SRP083700 SRR4098198 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.9 SRP115030 SRR5909344 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.9 ERP024350 ERR2061607 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
10.9 SRP083700 SRR4098201 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.9 ERP013234 ERR1142044 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.9 SRP092175 SRR4457260 Fundamental molecular bases for differential transcriptional programs of top leaves during grain-filling in rice
10.9 SRP115030 SRR5909345 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.9 SRP258176 SRR11601215 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.8 SRP151597 SRR7450910 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.8 SRP320302 SRR14575469 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 SRP357677 SRR17843175 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.8 SRP258176 SRR11601216 Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.
10.8 SRP151597 SRR7450912 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.8 SRP115030 SRR5909342 A viral protein promotes host SAMS1 activity and ethylene production for the benefit of virus infection
10.8 SRP320302 SRR14575474 The RNA-seq analysis of rice roots colonized by the endophytic bacterium Azoarcus olearius BH72 after one-, three- and seven-days post inoculation and after three days of boosted colonization.
10.8 SRP093884 SRR5052708 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
10.8 SRP115210 SRR5925496 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.8 SRP357677 SRR17843174 Transcriptome differences between wild-type and ERF096 transgenic rice before and after cold treatment
10.8 SRP309118 SRR13847347 A mycorrhiza-associated receptor-like kinase with an ancient origin in the green lineage
10.8 SRP093884 SRR5052713 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
10.8 SRP327364 SRR15060326 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.8 SRP254459 SRR11444588 Next Generation Sequencing Facilitates Quantitative Analysis of bHLH6 OV, spx4, and wild-type Transcriptomes
10.7 DRP000716 DRR002722 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.7 SRP151597 SRR7450911 Chromosomal deletions drove parallel domestication of plant architecture in Asian and African rice
10.7 SRP041468 SRR1564285 Oryza sativa Japonica Group Transcriptome or Gene expression
10.7 SRP115210 SRR5925526 mRNA sequencing of whole 15 d old Oryza sativa shoots
10.7 ERP013234 ERR1142058 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.7 SRP093884 SRR5052710 PREMATURE INTERNODE ELONGATION 1 coordinates internode elongation in response to florigenic signals at the shoot apex of rice
10.7 DRP000716 DRR002719 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.7 SRP170932 SRR8247767 A combined small RNA and transcriptome sequencing analysis illuminates the response of resistance to brown planthopper in rice [RNA-seq]
10.7 SRP083700 SRR4098175 Characterize novel lncRNAs responding to stresses in Oryza sativa at transcriptional and post-transcriptional levels
10.7 SRP041468 SRR1985017 Oryza sativa Japonica Group Transcriptome or Gene expression
10.6 ERP013234 ERR1142050 Rice perception of symbiotic arbuscular mychorrhizal fungi requires the karrikin receptor complex
10.6 SRP041468 SRR1564286 Oryza sativa Japonica Group Transcriptome or Gene expression
10.6 SRP049054 SRR1616570 Oryza sativa Japonica Group cultivar:Nipponbare Transcriptome or Gene expression
10.6 SRP327364 SRR15060375 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.6 DRP000716 DRR002693 Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles
10.6 SRP327364 SRR15060338 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.6 SRP327364 SRR15060386 Differentiation of the high night temperature response in leaf segments of rice cultivars with contrasting tolerance
10.6 SRP331960 SRR15411235 The Evening Complex integrates photoperiod signals to control flowering in rice [RNA-Seq]
10.6 SRP356482 SRR17720813 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
10.6 SRP041468 SRR1985011 Oryza sativa Japonica Group Transcriptome or Gene expression
10.6 SRP356482 SRR17720823 A plant-specific splicing factor RS33 regulates abiotic stress responses in rice
10.6 ERP024350 ERR2061597 Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
The output is the 100 samples with the largest contribution to the coexpression.



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