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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT2G20080   uncharacterized protein 
 ath-u.5   AT2G20080   uncharacterized protein 
 ath-r.7   AT2G20080   uncharacterized protein 
 ath-u.5   AT4G28840   mediator of RNA polymerase II transcription subunit 
 gma-u.5   100804813   uncharacterized LOC100804813 
 gma-u.5   100779060   protein SPEAR3 
 vvi-u.5   100268083   protein SPEAR3 
 ppo-u.5   18107746   protein SPEAR3 
 mtr-u.5   11442625   protein SPEAR1 
 mtr-u.5   11406019   protein SPEAR1 
 sly-u.5   101253755   protein SPEAR1-like 
 sot-r.1   102598300   uncharacterized LOC102598300 
 nta-r.1   107831190   protein SPEAR3-like 
 nta-r.1   107783206   protein SPEAR3-like 
 osa-u.5   107278054   protein SPEAR1 
 osa-u.5   4325520   protein SPEAR3 
 zma-u.5   103651359   uncharacterized LOC103651359 
 zma-u.5   103636172   uncharacterized LOC103636172 
 zma-u.5   103635319   uncharacterized LOC103635319 
 hvu-r.1   123419139   protein SPEAR3 
 hvu-r.1   123440091   protein SPEAR3-like 
 sbi-r.1   8061853   protein SPEAR1 

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Top 50 coexpressed genes to AT2G20080 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G20080 (ath-e.2 coexpression data)

CoexMap"816527"


athAT2G20080 | Entrez gene ID : 816527      
Species ath gma vvi ppo mtr sly sot nta osa zma hvu sbi cit bra tae bna ghi cre bdi
Paralog 4 2 1 1 2 1 1 2 2 3 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (200 genes)  ISS  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323449.1 [sequence] [blastp]
NP_179598.2 [sequence] [blastp]
NP_973486.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  vacu 1,  mito 1,  extr 1,  golg 1,  E.R._vacu 1  (predict for NP_001323449.1)
chlo 5,  nucl 5  (predict for NP_179598.2)
chlo 5,  nucl 5  (predict for NP_973486.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001323449.1)
chlo 9  (predict for NP_179598.2)
chlo 9  (predict for NP_973486.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT2G20080
ath-u.5
for
AT2G20080
ath-r.7
for
AT2G20080
ath-u.5
for
AT4G28840
gma-u.5
for
100804813
gma-u.5
for
100779060
vvi-u.5
for
100268083
ppo-u.5
for
18107746
mtr-u.5
for
11442625
mtr-u.5
for
11406019
sly-u.5
for
101253755
sot-r.1
for
102598300
nta-r.1
for
107831190
nta-r.1
for
107783206
osa-u.5
for
107278054
osa-u.5
for
4325520
zma-u.5
for
103651359
zma-u.5
for
103636172
zma-u.5
for
103635319
hvu-r.1
for
123419139
hvu-r.1
for
123440091
sbi-r.1
for
8061853


Ortholog ID: 2533
Species ath ath gma gma vvi ppo mtr mtr sly sot nta nta osa osa zma zma zma hvu hvu sbi
Symbol AT2G20080 AT4G28840 LOC100779060 LOC100527788 LOC100268083 LOC18107746 LOC11442625 LOC11406019 LOC101253755 LOC102598300 LOC107831190 LOC107783206 LOC107278054 LOC4325520 LOC103651359 LOC103636172 LOC103635319 LOC123419139 LOC123440091 LOC8061853
Function* uncharacterized protein mediator of RNA polymerase II transcription subunit protein SPEAR3 uncharacterized LOC100527788 protein SPEAR3 protein SPEAR3 protein SPEAR1 protein SPEAR1 protein SPEAR1-like uncharacterized LOC102598300 protein SPEAR3-like protein SPEAR3-like protein SPEAR1 protein SPEAR3 uncharacterized LOC103651359 uncharacterized LOC103636172 uncharacterized LOC103635319 protein SPEAR3 protein SPEAR3-like protein SPEAR1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 3
zma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816527 829005 100779060 100527788 100268083 18107746 11442625 11406019 101253755 102598300 107831190 107783206 107278054 4325520 103651359 103636172 103635319 123419139 123440091 8061853
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