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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT2G25625   histone deacetylase-like protein 
 ath-u.5   AT2G25625   histone deacetylase-like protein 
 ath-r.7   AT2G25625   histone deacetylase-like protein 
 ath-m.9   AT2G25625   histone deacetylase-like protein 
 ath-m.4.bio   AT2G25625   histone deacetylase-like protein 
 ath-m.4.hor   AT2G25625   histone deacetylase-like protein 
 ath-m.4.lig   AT2G25625   histone deacetylase-like protein 
 ath-m.4.str   AT2G25625   histone deacetylase-like protein 
 ath-m.4.tis   AT2G25625   histone deacetylase-like protein 
 bra-r.6   103864682   uncharacterized LOC103864682 
 bna-r.1   106449988   uncharacterized LOC106449988 
 bna-r.1   106394614   uncharacterized LOC106394614 
 ghi-r.1   121223504   uncharacterized LOC121223504 
 ghi-r.1   121209474   uncharacterized LOC121209474 
 cit-r.1   102609753   protein CHLOROPLAST VESICULATION 
 gma-u.5   102661561   uncharacterized LOC102661561 
 gma-u.5   100805091   uncharacterized LOC100805091 
 vvi-u.5   100261242   protein CHLOROPLAST VESICULATION 
 ppo-u.5   7495748   protein CHLOROPLAST VESICULATION 
 mtr-u.5   11429975   uncharacterized LOC11429975 
 sot-r.1   102591109   uncharacterized LOC102591109 
 nta-r.1   107760942   protein CHLOROPLAST VESICULATION 
 nta-r.1   107811787   protein CHLOROPLAST VESICULATION 
 osa-u.5   4339688   uncharacterized LOC4339688 
 zma-u.5   109940239   uncharacterized LOC109940239 
 zma-u.5   100275322   uncharacterized LOC100275322 
 tae-r.2   123177238   uncharacterized LOC123177238 
 tae-r.2   123182126   uncharacterized LOC123182126 
 hvu-r.1   123420348   uncharacterized LOC123420348 

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Top 50 coexpressed genes to AT2G25625 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G25625 (ath-e.2 coexpression data)

CoexMap"817103"


athAT2G25625 | Entrez gene ID : 817103      
Species ath bra bna ghi cit gma vvi ppo mtr sot nta osa zma tae hvu bdi sbi cre sly
Paralog 9 1 2 2 1 2 1 1 1 1 2 1 2 2 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1904821 [list] [network] chloroplast disassembly  (4 genes)  IMP  
GO:1902074 [list] [network] response to salt  (50 genes)  IEP IMP  
GO:0009735 [list] [network] response to cytokinin  (124 genes)  IEP  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IEP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IEP IMP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0097708 [list] [network] intracellular vesicle  (573 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  IDA  
GO:0005773 [list] [network] vacuole  (984 genes)  IDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_850063.1 [sequence] [blastp]
NP_850064.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  vacu 1  (predict for NP_850063.1)
chlo 6,  nucl 1,  cyto 1,  mito 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_850064.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_850063.1)
chlo 8  (predict for NP_850064.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT2G25625
ath-u.5
for
AT2G25625
ath-r.7
for
AT2G25625
ath-m.9
for
AT2G25625
ath-m.4.bio
for
AT2G25625
ath-m.4.hor
for
AT2G25625
ath-m.4.lig
for
AT2G25625
ath-m.4.str
for
AT2G25625
ath-m.4.tis
for
AT2G25625
bra-r.6
for
103864682
bna-r.1
for
106449988
bna-r.1
for
106394614
ghi-r.1
for
121223504
ghi-r.1
for
121209474
cit-r.1
for
102609753
gma-u.5
for
102661561
gma-u.5
for
100805091
vvi-u.5
for
100261242
ppo-u.5
for
7495748
mtr-u.5
for
11429975
sot-r.1
for
102591109
nta-r.1
for
107760942
nta-r.1
for
107811787
osa-u.5
for
4339688
zma-u.5
for
109940239
zma-u.5
for
100275322
tae-r.2
for
123177238
tae-r.2
for
123182126
hvu-r.1
for
123420348


Ortholog ID: 10675
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sot nta nta osa zma zma tae tae hvu
Symbol AT2G25625 LOC103864682 LOC106449988 LOC106394614 LOC121223504 LOC121209474 LOC102609753 LOC102661561 LOC100805091 LOC100261242 LOC7495748 LOC11429975 LOC102591109 LOC107760942 LOC107811787 LOC4339688 LOC109940239 LOC100275322 LOC123177238 LOC123182126 LOC123420348
Function* histone deacetylase-like protein uncharacterized LOC103864682 uncharacterized LOC106449988 uncharacterized LOC106394614 uncharacterized LOC121223504 uncharacterized LOC121209474 protein CHLOROPLAST VESICULATION uncharacterized LOC102661561 uncharacterized LOC100805091 protein CHLOROPLAST VESICULATION protein CHLOROPLAST VESICULATION uncharacterized LOC11429975 uncharacterized LOC102591109 protein CHLOROPLAST VESICULATION protein CHLOROPLAST VESICULATION uncharacterized LOC4339688 uncharacterized LOC109940239 uncharacterized LOC100275322 uncharacterized LOC123177238 uncharacterized LOC123182126 uncharacterized LOC123420348
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 6
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 6
nta00740 Riboflavin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00908 Zeatin biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817103 103864682 106449988 106394614 121223504 121209474 102609753 102661561 100805091 100261242 7495748 11429975 102591109 107760942 107811787 4339688 109940239 100275322 123177238 123182126 123420348
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