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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   HDT4   histone deacetylase-related / HD-like protein 
 ath-u.5   HDT4   histone deacetylase-related / HD-like protein 
 ath-r.7   HDT4   histone deacetylase-related / HD-like protein 
 ath-m.9   HDT4   histone deacetylase-related / HD-like protein 
 ath-m.4.bio   HDT4   histone deacetylase-related / HD-like protein 
 ath-m.4.hor   HDT4   histone deacetylase-related / HD-like protein 
 ath-m.4.lig   HDT4   histone deacetylase-related / HD-like protein 
 ath-m.4.str   HDT4   histone deacetylase-related / HD-like protein 
 ath-m.4.tis   HDT4   histone deacetylase-related / HD-like protein 
 bra-r.6   103864807   histone deacetylase HDT4 
 bna-r.1   106424280   histone deacetylase HDT4-like 
 bna-r.1   106449957   histone deacetylase HDT4-like 

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Top 50 coexpressed genes to HDT4 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HDT4 (ath-e.2 coexpression data)

CoexMap"817331"


athHDT4 | Entrez gene ID : 817331      
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (31 genes)  IGI  
GO:0010162 [list] [network] seed dormancy process  (42 genes)  IEP  
GO CC
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (17 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001318300.1 [sequence] [blastp]
NP_001324791.1 [sequence] [blastp]
NP_565661.2 [sequence] [blastp]
NP_850109.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  mito 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for NP_001318300.1)
nucl 5,  cyto 4  (predict for NP_001324791.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_565661.2)
nucl 4,  extr 3,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_850109.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001318300.1)
other 9  (predict for NP_001324791.1)
other 9  (predict for NP_565661.2)
other 8  (predict for NP_850109.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
HDT4
ath-u.5
for
HDT4
ath-r.7
for
HDT4
ath-m.9
for
HDT4
ath-m.4.bio
for
HDT4
ath-m.4.hor
for
HDT4
ath-m.4.lig
for
HDT4
ath-m.4.str
for
HDT4
ath-m.4.tis
for
HDT4
bra-r.6
for
103864807
bna-r.1
for
106424280
bna-r.1
for
106449957


Ortholog ID: 22537
Species ath bra bna bna
Symbol HDT4 LOC103864807 LOC106424280 LOC106449957
Function* histone deacetylase-related / HD-like protein histone deacetylase HDT4 histone deacetylase HDT4-like histone deacetylase HDT4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03010 Ribosome 2
bna03018 RNA degradation 2
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817331 103864807 106424280 106449957
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