ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-u.5	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-r.7	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-m.9	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-m.4.bio	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-m.4.hor	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-m.4.lig	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-m.4.str	LGO	LOSS OF GIANT CELLS FROM ORGANS
ath-m.4.tis	LGO	LOSS OF GIANT CELLS FROM ORGANS
bra-r.6	103847480	cyclin-dependent protein kinase inhibitor SMR1
bra-r.6	103859350	cyclin-dependent protein kinase inhibitor SMR1-like
bra-r.6	103870458	cyclin-dependent protein kinase inhibitor SMR1
bna-r.1	106385667	cyclin-dependent protein kinase inhibitor SMR1-like
bna-r.1	106379394	cyclin-dependent protein kinase inhibitor SMR1-like
bna-r.1	106377147	cyclin-dependent protein kinase inhibitor SMR1-like

Annotation

functional annotation

KEGG

GO BP

GO:0090393 [list] [network] sepal giant cell development	(1 genes)	IMP
GO:0032877 [list] [network] positive regulation of DNA endoreduplication	(6 genes)	IMP
GO:0042742 [list] [network] defense response to bacterium	(363 genes)	IMP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_566377.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, extr 1

(predict for NP_566377.1)

Subcellular
localization
TargetP

other 8

(predict for NP_566377.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for LGO	ath-u.5 for LGO	ath-r.7 for LGO	ath-m.9 for LGO	ath-m.4.bio for LGO	ath-m.4.hor for LGO	ath-m.4.lig for LGO	ath-m.4.str for LGO	ath-m.4.tis for LGO	bra-r.6 for 103847480	bra-r.6 for 103859350	bra-r.6 for 103870458	bna-r.1 for 106385667	bna-r.1 for 106379394	bna-r.1 for 106377147