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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-u.5   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-r.7   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-m.9   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-m.4.bio   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-m.4.hor   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-m.4.lig   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-m.4.str   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-m.4.tis   AT3G21810   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 bra-r.6   103834976   zinc finger CCCH domain-containing protein 40 
 bna-r.1   106435038   zinc finger CCCH domain-containing protein 40 
 bna-r.1   106376905   zinc finger CCCH domain-containing protein 40 
 ghi-r.1   107886833   zinc finger CCCH domain-containing protein 40 
 ghi-r.1   107886905   zinc finger CCCH domain-containing protein 40 
 cit-r.1   102618292   zinc finger CCCH domain-containing protein 13 
 gma-u.5   100811131   zinc finger CCCH domain-containing protein 13 
 gma-u.5   100793596   zinc finger CCCH domain-containing protein 13 
 vvi-u.5   100244801   zinc finger CCCH domain-containing protein 13 
 ppo-u.5   7491789   zinc finger CCCH domain-containing protein 13 
 mtr-u.5   25492102   zinc finger CCCH domain-containing protein 13 
 sly-u.5   101246216   zinc finger CCCH domain-containing protein 13 
 sot-r.1   102587292   zinc finger CCCH domain-containing protein 13 
 nta-r.1   107769859   zinc finger CCCH domain-containing protein 13 
 nta-r.1   107765433   zinc finger CCCH domain-containing protein 13-like 
 osa-u.5   4328385   zinc finger CCCH domain-containing protein 13-like 
 osa-u.5   4341865   zinc finger CCCH domain-containing protein 13-like 
 zma-u.5   100273733   uncharacterized LOC100273733 
 zma-u.5   100273103   uncharacterized LOC100273103 
 zma-u.5   100192091   uncharacterized LOC100192091 
 tae-r.2   123136425   zinc finger CCCH domain-containing protein 13 
 tae-r.2   123143936   zinc finger CCCH domain-containing protein 13 
 tae-r.2   123148962   zinc finger CCCH domain-containing protein 13 
 hvu-r.1   123401393   zinc finger CCCH domain-containing protein 13-like 
 hvu-r.1   123410104   zinc finger CCCH domain-containing protein 13-like 
 sbi-r.1   8083300   zinc finger CCCH domain-containing protein 13 
 sbi-r.1   8074672   zinc finger CCCH domain-containing protein 13 
 bdi-r.1   100846486   zinc finger CCCH domain-containing protein 13 
 bdi-r.1   100843186   zinc finger CCCH domain-containing protein 13 

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Top 50 coexpressed genes to AT3G21810 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G21810 (ath-e.2 coexpression data)

CoexMap"821735"


athAT3G21810 | Entrez gene ID : 821735      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046872 [list] [network] metal ion binding  (945 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325720.1 [sequence] [blastp]
NP_566691.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for NP_001325720.1)
nucl 8,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for NP_566691.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001325720.1)
other 3  (predict for NP_566691.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT3G21810
ath-u.5
for
AT3G21810
ath-r.7
for
AT3G21810
ath-m.9
for
AT3G21810
ath-m.4.bio
for
AT3G21810
ath-m.4.hor
for
AT3G21810
ath-m.4.lig
for
AT3G21810
ath-m.4.str
for
AT3G21810
ath-m.4.tis
for
AT3G21810
bra-r.6
for
103834976
bna-r.1
for
106435038
bna-r.1
for
106376905
ghi-r.1
for
107886833
ghi-r.1
for
107886905
cit-r.1
for
102618292
gma-u.5
for
100811131
gma-u.5
for
100793596
vvi-u.5
for
100244801
ppo-u.5
for
7491789
mtr-u.5
for
25492102
sly-u.5
for
101246216
sot-r.1
for
102587292
nta-r.1
for
107769859
nta-r.1
for
107765433
osa-u.5
for
4328385
osa-u.5
for
4341865
zma-u.5
for
100273733
zma-u.5
for
100273103
zma-u.5
for
100192091
tae-r.2
for
123136425
tae-r.2
for
123143936
tae-r.2
for
123148962
hvu-r.1
for
123401393
hvu-r.1
for
123410104
sbi-r.1
for
8083300
sbi-r.1
for
8074672
bdi-r.1
for
100846486
bdi-r.1
for
100843186


Ortholog ID: 6568
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol AT3G21810 LOC103834976 LOC106435038 LOC106376905 LOC107886833 LOC107886905 LOC102618292 LOC100811131 LOC100793596 LOC100244801 LOC7491789 LOC25492102 LOC101246216 LOC102587292 LOC107769859 LOC107765433 LOC4328385 LOC4341865 LOC100273733 LOC100273103 LOC100192091 LOC123143936 LOC123148962 LOC123156785 LOC123401393 LOC123410104 LOC8083300 LOC8074672 LOC100846486 LOC100843186
Function* Zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 40 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13-like zinc finger CCCH domain-containing protein 13-like zinc finger CCCH domain-containing protein 13-like uncharacterized LOC100273733 uncharacterized LOC100273103 uncharacterized LOC100192091 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13-like zinc finger CCCH domain-containing protein 13-like zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13 zinc finger CCCH domain-containing protein 13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00564 Glycerophospholipid metabolism 2
ath00565 Ether lipid metabolism 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 4
bna00513 Various types of N-glycan biosynthesis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 4
bna00513 Various types of N-glycan biosynthesis 4
bna04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821735 103834976 106435038 106376905 107886833 107886905 102618292 100811131 100793596 100244801 7491789 25492102 101246216 102587292 107769859 107765433 4328385 4341865 100273733 100273103 100192091 123143936 123148962 123156785 123401393 123410104 8083300 8074672 100846486 100843186
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