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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-e.2   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-u.5   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-r.7   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-m.9   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-m.4.bio   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-m.4.hor   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-m.4.lig   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-m.4.str   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 ath-m.4.tis   AT3G58730   vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) 
 bra-r.6   103841748   V-type proton ATPase subunit D 
 bra-r.6   103830181   V-type proton ATPase subunit D 
 bna-r.1   106428250   V-type proton ATPase subunit D 
 bna-r.1   106353176   V-type proton ATPase subunit D 
 bna-r.1   106416212   V-type proton ATPase subunit D 
 ghi-r.1   107959706   V-type proton ATPase subunit D 
 ghi-r.1   107959679   V-type proton ATPase subunit D 
 ghi-r.1   107924568   V-type proton ATPase subunit D 
 cit-r.1   102620711   V-type proton ATPase subunit D 
 gma-u.5   100808847   V-type proton ATPase subunit D 
 gma-u.5   100801612   V-type proton ATPase subunit D 
 vvi-u.5   100259129   V-type proton ATPase subunit D 
 ppo-u.5   7495775   V-type proton ATPase subunit D 
 mtr-u.5   11424764   V-type proton ATPase subunit D 
 sly-u.5   101246756   V-type proton ATPase subunit D 
 sot-r.1   102592386   V-type proton ATPase subunit D 
 nta-r.1   107786463   V-type proton ATPase subunit D-like 
 nta-r.1   107821573   V-type proton ATPase subunit D 
 nta-r.1   107820819   V-type proton ATPase subunit D 
 osa-u.5   4337176   V-type proton ATPase subunit D 
 zma-u.5   100193069   V-type proton ATPase subunit D 
 zma-u.5   100283330   uncharacterized LOC100283330 
 tae-r.2   123047161   V-type proton ATPase subunit D 
 tae-r.2   123054967   V-type proton ATPase subunit D 
 tae-r.2   123190818   V-type proton ATPase subunit D 
 hvu-r.1   123428186   V-type proton ATPase subunit D 
 sbi-r.1   8068468   V-type proton ATPase subunit D 
 bdi-r.1   100824871   V-type proton ATPase subunit D 
 cre-r.1   CHLRE_09g405050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G58730 (ath-e.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G58730 (ath-e.2 coexpression data)

CoexMap"825042"


athAT3G58730 | Entrez gene ID : 825042      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 1 1 1 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00190 [list] [network] Oxidative phosphorylation (170 genes)
ath04145 [list] [network] Phagosome (87 genes)
GO BP
GO CC
GO:0005774 [list] [network] vacuolar membrane  (164 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
GO:0046961 [list] [network] proton-transporting ATPase activity, rotational mechanism  (19 genes)  IEA  
Protein NP_191432.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_191432.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_191432.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-e.2
for
AT3G58730
ath-u.5
for
AT3G58730
ath-r.7
for
AT3G58730
ath-m.9
for
AT3G58730
ath-m.4.bio
for
AT3G58730
ath-m.4.hor
for
AT3G58730
ath-m.4.lig
for
AT3G58730
ath-m.4.str
for
AT3G58730
ath-m.4.tis
for
AT3G58730
bra-r.6
for
103841748
bra-r.6
for
103830181
bna-r.1
for
106428250
bna-r.1
for
106353176
bna-r.1
for
106416212
ghi-r.1
for
107959706
ghi-r.1
for
107959679
ghi-r.1
for
107924568
cit-r.1
for
102620711
gma-u.5
for
100808847
gma-u.5
for
100801612
vvi-u.5
for
100259129
ppo-u.5
for
7495775
mtr-u.5
for
11424764
sly-u.5
for
101246756
sot-r.1
for
102592386
nta-r.1
for
107786463
nta-r.1
for
107821573
nta-r.1
for
107820819
osa-u.5
for
4337176
zma-u.5
for
100193069
zma-u.5
for
100283330
tae-r.2
for
123047161
tae-r.2
for
123054967
tae-r.2
for
123190818
hvu-r.1
for
123428186
sbi-r.1
for
8068468
bdi-r.1
for
100824871
cre-r.1
for
CHLRE_09g405050v5


Ortholog ID: 6025
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT3G58730 LOC103841748 LOC103830181 LOC106353176 LOC106416212 LOC106368300 LOC107959679 LOC107924568 LOC107911710 LOC102620711 LOC100808847 LOC100801612 LOC100259129 LOC7495775 LOC11424764 LOC101246756 LOC102592386 LOC107821573 LOC107820819 LOC142181637 LOC4337176 LOC100193069 LOC100283330 LOC123047161 LOC123054967 LOC123190818 LOC123428186 LOC8068468 LOC100824871 CHLRE_09g405050v5
Function* vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D-like V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D-like V-type proton ATPase subunit D V-type proton ATPase subunit D uncharacterized LOC100283330 V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D V-type proton ATPase subunit D uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 12
ath04145 Phagosome 12
ath04142 Lysosome 5
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 5
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 11
bra04145 Phagosome 6
bra04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 5
bna04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 8
ghi04145 Phagosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi04145 Phagosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 7
ghi04145 Phagosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma04120 Ubiquitin mediated proteolysis 3
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
gma04145 Phagosome 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
vvi04145 Phagosome 4
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 7
ppo04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 11
mtr04145 Phagosome 10
mtr04142 Lysosome 6
mtr01200 Carbon metabolism 3
mtr00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
sly04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 10
sot04145 Phagosome 10
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 16
nta04145 Phagosome 8
nta00230 Purine metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 8
nta04145 Phagosome 7
nta00230 Purine metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 10
nta04145 Phagosome 8
nta03250 Viral life cycle - HIV-1 2
nta00230 Purine metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 10
osa04145 Phagosome 9
osa04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 11
zma04145 Phagosome 11
zma04142 Lysosome 6
zma01210 2-Oxocarboxylic acid metabolism 3
zma00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 12
zma04145 Phagosome 12
zma04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 15
tae04145 Phagosome 9
tae04142 Lysosome 7
tae01200 Carbon metabolism 5
tae00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 14
tae04145 Phagosome 9
tae04142 Lysosome 7
tae00020 Citrate cycle (TCA cycle) 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00010 Glycolysis / Gluconeogenesis 7
hvu00190 Oxidative phosphorylation 7
hvu01230 Biosynthesis of amino acids 5
hvu00710 Carbon fixation by Calvin cycle 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 12
sbi04145 Phagosome 11
sbi04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 6
bdi04145 Phagosome 5
bdi04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 9
cre04145 Phagosome 9
cre04142 Lysosome 4
cre00020 Citrate cycle (TCA cycle) 3
cre01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825042 103841748 103830181 106353176 106416212 106368300 107959679 107924568 107911710 102620711 100808847 100801612 100259129 7495775 11424764 101246756 102592386 107821573 107820819 142181637 4337176 100193069 100283330 123047161 123054967 123190818 123428186 8068468 100824871 5720779
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