ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-e.2	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-u.5	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-r.7	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-m.9	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-m.4.bio	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-m.4.hor	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-m.4.lig	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-m.4.str	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
ath-m.4.tis	TBL6	TRICHOME BIREFRINGENCE-LIKE 6
bra-r.6	103842055	protein trichome birefringence-like 6
bna-r.1	106451994	protein trichome birefringence-like 6
bna-r.1	106417755	protein trichome birefringence-like 6
ghi-r.1	107945998	protein trichome birefringence-like 6
ghi-r.1	107940571	protein trichome birefringence-like 6
cit-r.1	102606621	protein trichome birefringence-like 6
gma-u.5	100819457	protein trichome birefringence-like 6
gma-u.5	100790898	protein trichome birefringence-like 6
vvi-u.5	100260535	protein trichome birefringence-like 6
ppo-u.5	7460458	protein trichome birefringence-like 6
mtr-u.5	11436374	protein trichome birefringence-like 6
sly-u.5	101266450	protein trichome birefringence-like 6
sot-r.1	102598625	protein trichome birefringence-like 6
nta-r.1	107769802	protein trichome birefringence-like 6
nta-r.1	107801571	protein trichome birefringence-like 6
osa-u.5	4332611	protein trichome birefringence-like 6
zma-u.5	103639219	protein trichome birefringence-like 6
tae-r.2	123097676	protein trichome birefringence-like 6
tae-r.2	123085670	protein trichome birefringence-like 6
hvu-r.1	123448824	protein trichome birefringence-like 6
sbi-r.1	8081077	protein trichome birefringence-like 6
bdi-r.1	100826101	protein trichome birefringence-like 6

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001326574.1 [sequence] [blastp]
NP_191798.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, mito 2, chlo 1, extr 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for NP_001326574.1)
mito 2, vacu 2, nucl 1, cyto 1, extr 1, cyto_nucl 1, chlo_mito 1, mito_plas 1	(predict for NP_191798.1)

Subcellular
localization
TargetP

scret 2	(predict for NP_001326574.1)
scret 2	(predict for NP_191798.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-e.2 for TBL6	ath-u.5 for TBL6	ath-r.7 for TBL6	ath-m.9 for TBL6	ath-m.4.bio for TBL6	ath-m.4.hor for TBL6	ath-m.4.lig for TBL6	ath-m.4.str for TBL6	ath-m.4.tis for TBL6	bra-r.6 for 103842055	bna-r.1 for 106451994	bna-r.1 for 106417755	ghi-r.1 for 107945998	ghi-r.1 for 107940571	cit-r.1 for 102606621	gma-u.5 for 100819457	gma-u.5 for 100790898	vvi-u.5 for 100260535	ppo-u.5 for 7460458	mtr-u.5 for 11436374	sly-u.5 for 101266450	sot-r.1 for 102598625	nta-r.1 for 107769802	nta-r.1 for 107801571	osa-u.5 for 4332611	zma-u.5 for 103639219	tae-r.2 for 123097676	tae-r.2 for 123085670	hvu-r.1 for 123448824	sbi-r.1 for 8081077	bdi-r.1 for 100826101

Ortholog

Ortholog ID: 9552

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TBL6

Function^*

TRICHOME BIREFRINGENCE-LIKE 6

protein trichome birefringence-like 6

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi04145	Phagosome	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi04145	Phagosome	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi04148	Efferocytosis	2
ghi04517	IgSF CAM signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	3
gma00564	Glycerophospholipid metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00670	One carbon pool by folate	2
gma00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	3
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	2
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00310	Lysine degradation	3
sbi00280	Valine, leucine and isoleucine degradation	3
sbi00330	Arginine and proline metabolism	2
sbi00640	Propanoate metabolism	2
sbi00620	Pyruvate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

825412

103842055

106451994

106417755

107945998

107940571

102606621

100819457

100790898

100260535

7460458

11436374

101266450

102598625

107769802

107801571

4332611

103639219

123097676

123085670

123448824

8081077

100826101

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to TBL6 (ath-e.2 coexpression data)

Top 50 enrichment test to TBL6 (ath-e.2 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	1	2	2	1	2	1	1	1	1	1	2	1	1	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to TBL6 (ath-e.2 coexpression data)

Top 50 enrichment test to TBL6 (ath-e.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**